Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq977 96.9 8e-15
seq4873 87.8 4e-12
>seq977
Length=6114
Score = 96.9 bits (106), Expect = 8e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || || || ||||| || | || |||||| || ||
Sbjct 4767 CAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTCGAGGTGGAATCATCCGAT 4826
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||||||||| || || || ||| |||||| ||
Sbjct 4827 ACTATCGACAATGTTAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAGCAG 4886
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || || ||||| || ||||||||||| ||||| | || ||| | || |||||| |
Sbjct 4887 CGCCTGATTTTCGCAGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCGGACTACAACATT 4946
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| ||||| ||||| || | ||| | | |||||
Sbjct 4947 CAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTCTTCG 4984
Score = 93.3 bits (102), Expect = 1e-13
Identities = 134/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || || ||||||||||| || || || ||||| ||||
Sbjct 4551 AAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCCGACACCATCGACAAC 4610
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| |||||||| || || || || ||| |||||| || | || || |||
Sbjct 4611 GTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTGATTTTC 4670
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| | || || || | ||| | ||||||||||| | ||||| |||||
Sbjct 4671 GCTGGTAAGCAGCTTGAGGACGGCCGCACTCTCTCCGATTACAACATTCAGAAGGAGTCG 4730
Query 206365 ACTCTTCAC 206373
|||||||||
Sbjct 4731 ACTCTTCAC 4739
>seq4873
Length=13461
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| | || ||||| || ||||| ||||
Sbjct 6370 AAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCATCCGACACTATCGACAAT 6311
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || |||||| |||||| || | | ||||||
Sbjct 6310 GTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCTTGATCTTC 6251
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || ||||| | || | | || |||||| ||||||| |||||
Sbjct 6250 GCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCC 6191
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
||||||||| | || ||||||| ||
Sbjct 6190 ACTCTTCACTTGGTCCTGAGACTCCG 6165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181716622496480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |