Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq499 109 8e-18
seq3646 89.7 7e-12
>seq499
Length=3129
Score = 109 bits (120), Expect = 8e-18
Identities = 182/261 (70%), Gaps = 8/261 (3%)
Strand=Plus/Minus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
|| || ||||| |||||||| || || | | ||| ||||| ||||| || | |||
Sbjct 866 CCAACACTCTTCAATGCCGGTACACCACAGGCTCAGCTGTCGTCCTGCTTCTTGGTCGAC 807
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| || || ||||| ||||||||||| |||||| || || | |||||
Sbjct 806 ATGAAGGAGGACAGTATTGAGGGTATCTATGACACACTCAAGACCTGTGCCATGATCTCA 747
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACA--CAAGG--TGCGCGCCGCGGGCGCCTA 260100
||| | ||||| || ||||| || | ||| || | | || ||| | || || ||
Sbjct 746 AAGACCGCCGGAGGTATCGGATT----GAACATCCATCGTATCCGTGCCACTGGTGCATA 691
Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160
| | || || |||||||| | || || || | || |||||||| ||||| || ||| |
Sbjct 690 CATCGCTGGTACCAACGGAAACTCGAATGGTATCGTTCCCATGCTCCGCGTCTTCAACAA 631
Query 260161 CACGGCGCGCTACGTCGACCA 260181
||| || | ||||| |||||
Sbjct 630 CACTGCAAGATACGTTGACCA 610
>seq3646
Length=8928
Score = 89.7 bits (98), Expect = 7e-12
Identities = 170/245 (69%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590
|||||| || || ||| ||||||| | | |||| | || || ||||| ||||
Sbjct 1127 CGAGGCTGTTAGCATTGAGCAAGAGTTCCTGACCGAGGCACTTCCCTGTGCGCTGCTCGG 1068
Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650
||||||||||| | | ||| || ||||||| | || ||||||||| | |||||
Sbjct 1067 CATGAACGCCAAC-TTGATGAAGCAATACATTG-AGTTCGTCGCCGACAGGCTGCTTCTT 1010
Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGAT 1456710
| |||||| | |||||| |||| |||||||||| ||| | |||||| ||
Sbjct 1009 TCTCTCGGCAAC-GAGAAGTTCTACAAATCGGCCAACCCATTCGACTTCATGGAGAACAT 951
Query 1456711 CTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCAAGGCCGG 1456769
||| || | || ||||| ||||| |||||| ||||| ||||| ||| ||| | ||
Sbjct 950 CTCCCTGGCCGGTAAGACTAACTTCTTCGAGAAGCGCGTCGGCGACTACCAAAAGACTGG 891
Query 1456770 CGTCA 1456774
||||
Sbjct 890 TGTCA 886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177147611354560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |