Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq3646 127 3e-24
>seq3646
Length=8928
Score = 127 bits (140), Expect = 3e-24
Identities = 367/559 (66%), Gaps = 8/559 (1%)
Strand=Plus/Plus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
||||||||||||| || || ||||| || | ||| | |||||||| || || ||
Sbjct 1187 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAG 1246
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|||| ||| || |||||||| || ||||| || |||| || || || ||||| |||||
Sbjct 1247 GCCAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAA 1306
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATG 39792
|| || || || || || || ||||| || | || || | | | ||| || ||
Sbjct 1307 AATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAGGTAGAATCCTTGTCTTG 1366
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
|||||| | |||||||| || |||||||| | ||||| || || || || |||||
Sbjct 1367 GATCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATT 1426
Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911
||||| | |||| || | | || || | ||||| || || | || ||
Sbjct 1427 GAAGAGGT-ATGTGCGTTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAGGGAGTATG 1485
Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971
| || | || ||||| || ||| || || || ||||| || || | ||||| | |
Sbjct 1486 TCTCGGCGTGAATGTTCTCGATCATAATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 1545
Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031
|||| ||||| | || | || | || || || || ||||| || ||||
Sbjct 1546 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCCGACGCGG 1605
Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GGTG-TCAATTTATTCC 40088
| || || || | || || || || || |||||| | || || ||||
Sbjct 1606 CGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGGCGGTTGTTCC 1665
Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148
|||| | || || || || | ||| | || || |||||||| || || ||||| ||||
Sbjct 1666 AGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGAGGCCTCCGCCT 1725
Query 40149 TTTTGTACATGTTCCATAT 40167
| |||||||| | ||| ||
Sbjct 1726 TCTTGTACATCTGCCAGAT 1744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686849725843200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |