Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq499 219 5e-52
seq3646 100 4e-16
>seq499
Length=3129
Score = 219 bits (242), Expect = 5e-52
Identities = 621/941 (66%), Gaps = 21/941 (2%)
Strand=Plus/Plus
Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280
|||||| |||| ||||| | |||||||| || || || || |||||| | | | |
Sbjct 109 ACATACGTTGGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAG 168
Query 111281 TACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 111340
||||| | ||| ||||| || | |||||| || ||| || || | ||||| |||||
Sbjct 169 TACTCGACAATCTCTGTGCAAAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTG 228
Query 111341 CTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAT 111400
||||| |||||| ||||||||||| |||||| | || | || ||||| || || |
Sbjct 229 CTCTTGCGGTTGCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCC 288
Query 111401 TTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTG---GCCCGTCCCTC 111456
| |||||| | | ||||| | || | | || | |||| ||| || ||| ||
Sbjct 289 TCGAGAATGGAGTACCAAAGCTTCTGGGCCTTG----ATGGTCTTGCGACCCTTTCCATC 344
Query 111457 CGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGG 111516
| |||||| | ||| || || |||||||| || || |||| | | || ||
Sbjct 345 CCTCTCGTAGCTCTCGTAAAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGG 404
Query 111517 TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAG 111576
|| || || || | || | ||| | ||| | |||||| ||||||||||| ||
Sbjct 405 GCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAG 464
Query 111577 GTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGT 111635
|| || ||||| || | | || | || | ||| || | || || | || ||||
Sbjct 465 ATCCGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGA-CTTCCTCCTTGCCGTGGT 523
Query 111636 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 111695
| || || || |||||||| | || |||||||||||||||||| | |||| ||||
Sbjct 524 TCTTTCTCAAGTCTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGA 583
Query 111696 TAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACG 111751
|| || | | | | ||| |||| | || || | || ||| ||| || |||
Sbjct 584 AAGCACCAGGGCGCTTGTTG-CCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGACG 642
Query 111752 CGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTG 111811
|| ||||| |||| ||||||| || | || || || || || | | ||
Sbjct 643 CGGAGCATGGGAACGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTG 702
Query 111812 GCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACAC 111871
|| | | | |||||||| || || ||||| || || ||||||||| |||||
Sbjct 703 GCACGGATACGATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAG 762
Query 111872 TCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAA 111931
| | || || |||||||||| | || ||||||||| || ||| | ||||||
Sbjct 763 GTCTTGAGTGTGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAG 822
Query 111932 CTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAAC 111991
|||| ||| | ||||||||| ||||||||||| ||||| | ||||| ||||
Sbjct 823 GACGACAGCTGAGCCTGTGGTGTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA- 881
Query 111992 ATACCTTGG--GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 112049
|| |||| ||||| || ||||||||| | ||||| || || ||||| |
Sbjct 882 GTA-TTTGGAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAA 940
Query 112050 TGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCC 112109
|||| | || || ||||| | ||||| ||| || | || | | ||||| || |
Sbjct 941 TGCCCACCGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTTTCCATCAAGAC 1000
Query 112110 GTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
| ||||||| | || |||| || || |||| ||||||||
Sbjct 1001 GGAGAAGATACGATC-TCTCCAGTGTCTTGAAGCCAAAGTA 1040
>seq3646
Length=8928
Score = 100 bits (110), Expect = 4e-16
Identities = 331/509 (65%), Gaps = 7/509 (1%)
Strand=Plus/Plus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
|||||||||||| || |||||||| || || || |||||| || || | |||||| ||
Sbjct 1202 GTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGGCCAGCCATGAGGCC 1261
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789
|||||||| | ||| |||| | ||| || || |||||||| |||||||| ||
Sbjct 1262 ACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAAATACCCTCAACGGC 1321
Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849
|| || |||| || || | |||||||| | ||| | | | ||| | | ||
Sbjct 1322 AGCGAAGGCAACGAGACGCTGGGCGAAGGTAGAATCCTTGTCTTGGATCCACCTGACAGC 1381
Query 122850 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 122909
||| | |||||||||| || || || | || | |||||| | || | | |
Sbjct 1382 CCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGCG 1441
Query 122910 TTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT 122969
|| || | ||||| |||||| ||||||| | || ||||| ||| | |||| |
Sbjct 1442 TTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAGGGAGTATGTCTCGGCGTGAATGTT 1501
Query 122970 TTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCG 123028
|| || || ||| | ||||||| |||| ||||| || || ||||| | |
Sbjct 1502 CTCGATCAT-AATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCTG 1559
Query 123029 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 123087
| || | | || ||||| |||||||| || ||| | || ||||| || ||
Sbjct 1560 CTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCCGACGCGGCGAAGAAAGCGAGA 1619
Query 123088 ATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATCT 123144
| || ||||| | |||| || || | || | |||||||||| || ||
Sbjct 1620 ACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGGCGGTTGTTCCAGTCGTGGAGGTCC 1679
Query 123145 TTGGACAAATCAACTTCTTCCGCAGTCCA 123173
||||| | ||||| || || || |||||
Sbjct 1680 TTGGAGAGATCAATCTCCTCTGCTGTCCA 1708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627977989248000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |