Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq499 203 4e-47
seq3646 123 3e-23
>seq499
Length=3129
Score = 203 bits (224), Expect = 4e-47
Identities = 620/947 (65%), Gaps = 25/947 (3%)
Strand=Plus/Minus
Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGTGTC-TTGA 104213
|| ||||| |||| || || |||| || | ||||||| || || ||||| |||
Sbjct 1040 TACTTTGGCTTCAAGACACTGGAGA-GATCGTATCTTCTCCGTCTTGATGGAAAGGTTGC 982
Query 104214 TGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTG 104273
|| | | || ||| ||||| | ||||| || || | || ||||| || || || ||||
Sbjct 981 TG-AGAGGCCGCAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGCGAGGATATTG 923
Query 104274 ATTCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACC 104331
| | ||||||||| || ||||| |||| || |||| ||||| | ||
Sbjct 922 AGAAGACAATCGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCTTCCCC 865
Query 104332 AACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAA 104391
||| ||||||||||| ||||||||| | || |||| |||||| | ||| ||
Sbjct 864 AACACTCTTCAATGCCGGTACACCACAGGCTCAGCTGTCGTCCTGCTTCTTGGTCGACAT 805
Query 104392 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAA 104451
||||||||| || | |||||||||| || || | | ||||| ||||||||
Sbjct 804 GAAGGAGGACAGTATTGAGGGTATCTATGACACACTCAAGACCTGTGCCATGATCTCAAA 745
Query 104452 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCG 104511
| || || ||||| || || |||||||| | | | |||| | | ||
Sbjct 744 GACCGCCGGAGGTATCGGATTGAACATCCATCGTATCCGTGCCACTGGTGCATACATCGC 685
Query 104512 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 104571
|| || || || | || ||||||| |||| ||||| ||||| || ||| ||| ||
Sbjct 684 TGGTACCAACGGAAACTCGAATGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGC 625
Query 104572 GCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGC 104627
| || || | |||| ||| | | | | || || |||| |||| | ||||
Sbjct 624 AAGATACGTTGACCAAGGTGG-CAACAAGCGCCCTGGTGCTTTCGCCATCTACGTCGAGC 566
Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687
|||||||||||||| || | |||||||| || ||| | ||||| || | ||||| |
Sbjct 565 CATGGCACGCGGATGTCTTTGAGTTCCTAGACTTGAGAAAGAACCACGGCAAGGAGGAAG 506
Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747
|| ||| || | |||| |||||||||||| || ||||||||||||||| | ||||
Sbjct 505 TCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTG 446
Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807
|| ||| || | ||| | ||| | || || || || ||||| | | || |
Sbjct 445 AGAAGAACGGTGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGGTTGGCTGACGTTT 386
Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAG------GAAGAAGGTCGGGCGA 104861
|| || |||||||| || |||||| | |||||| | | | ||||| ||
Sbjct 385 ACGGCGATGAGTTTGAGGCGCTTTACGAGAGCTACGAGAGGGATGGAAAGGGTCGCAAGA 326
Query 104862 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921
| | || |||| || | ||| | | |||||| || ||||||| ||||| |
Sbjct 325 CCATCAAGG-CCCAGAAGC-----TTTGGTACTCCATTCTCGAGGCTCAAACTGAGACAG 272
Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981
| | || | |||||| ||||| || || || |||| ||||| || || ||||| | |
Sbjct 271 GAAACCCTTTCATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCG 212
Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 105041
|| || || ||||| || || ||||| || | || | | | ||||||
Sbjct 211 GTACCATTCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCTCCTGATGAGG 152
Query 105042 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT 105088
|| ||||||||| | ||||| | || || || | |||||| |||
Sbjct 151 TTGCCGTGTGTAACTTGGCATCCCTTGCCCTGCCAACGTATGTTGAT 105
>seq3646
Length=8928
Score = 123 bits (136), Expect = 3e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773
||||| | |||||| | || |||| || || | ||||| || ||||||||| | | |
Sbjct 1432 CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCCGATTGGGCTGTCAGG 1373
Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832
||| | | |||| | | | |||| || |||| ||| | || || || |||||
Sbjct 1372 TGGATCCAAGACAAGGATTC-TACCTTCGCCCAGCGTCTCGTTGCCTTCGCTGCCGTTGA 1314
Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892
|||||| ||||||||||| |||||| | |||| ||||| |||||||| || |||||
Sbjct 1313 GGGTATTTTCTTCTCTGGCTCCTTCGCATCCATTTTCTGGCTTAAGAAGCGTGGCCTCAT 1254
Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
| | || || |||||| |||||||| || || || |||||||| ||||||
Sbjct 1253 GGCTGGCCTTACCTTCTCTAACGAGCTCATTTCCCGCGACGAGGGTCTCCAC 1202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583210639571200
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