Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq499 228 9e-55
seq3646 118 1e-21
seq498 98.7 1e-15
>seq499
Length=3129
Score = 228 bits (252), Expect = 9e-55
Identities = 482/710 (68%), Gaps = 18/710 (3%)
Strand=Plus/Minus
Query 53243 GAGACGTACGACTTAATGAG--CCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCA 53300
||||| ||| || | ||| ||||| ||||| || ||||| | ||||| || ||||
Sbjct 911 GAGACATACAACCTCATGTCTTCCAAA--TACTTCACACACGCTTCCCCAACACTCTTCA 854
Query 53301 ACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACT 53360
| || ||||| || ||||| ||||| ||||||| |||| | |||||||| |||
Sbjct 853 ATGCCGGTACACCACAGGCTCAGCTGTCGTCCTGCTTCTTGGTCGACATGAAGGAGGACA 794
Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420
|| || || ||||| || || |||||| |||||| ||||| ||| | || |
Sbjct 793 GTATTGAGGGTATCTATGACACACTCAAGACCTGTGCCATGATCTCAAAGACCGCCGGAG 734
Query 53421 GTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAA 53478
||||||| | || | ||| | ||||||| | || || ||| || || ||
Sbjct 733 GTATCGGATTGAACATCCATCGTA--TCCGTGCCACTGGTGCATACATCGCTGGTACCAA 676
Query 53479 CGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGT 53538
||| | | |||| ||||| || ||||||||||||||||||||||| || | |||||
Sbjct 675 CGGAAACTCGAATGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCAAGATACGT 616
Query 53539 CAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGC 53598
|||| ||||| |||||| || | |||||||||||| ||||||| ||||||||
Sbjct 615 TGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTCGAGCCATGGCACGC 556
Query 53599 CGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCG 53658
|| | | ||||| || || || | ||| || || | || || | || |||
Sbjct 555 GGATGTCTTTGAGTTCCTAGACTTGAGAAAGAACCACGGCAAGGAGGAAGTCCGTGCCCG 496
Query 53659 TGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717
|||| |||| ||| ||||| ||||| ||||| ||||||||| | || |||||| |||
Sbjct 495 TGACTTGTTCTAC-GCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGAAGAACG 437
Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGG 53777
|| ||| ||| |||||||| ||||||||||| || | | || ||||| || |
Sbjct 436 GTGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGGTTGGCTGACGTTTACGGCGATG 377
Query 53778 AGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG----AAGAAGGTC 53833
||||| | | | | || || |||| || |||| | | | |||| ||
Sbjct 376 AGTTTGAGGCGCTTTACGAGAGCTACG-AG---AGGGATGGAAAGGGTCGCAAGACCATC 321
Query 53834 AAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTAC 53893
||||| | || | ||| | | || ||| || || ||||| |||| || | |
Sbjct 320 AAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGGCTCAAACTGAGACAGGAAACCCTTTC 261
Query 53894 ATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
||| ||||||||| | |||| |||||||||||||||||| ||||
Sbjct 260 ATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 211
>seq3646
Length=8928
Score = 118 bits (130), Expect = 1e-21
Identities = 337/511 (66%), Gaps = 18/511 (4%)
Strand=Plus/Plus
Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849
|| || || || | |||||||| ||| || ||||||||||| | ||| || |||| |
Sbjct 1230 TCGTTAGAGAAGGTAAGGCCAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCG 1289
Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909
||||| ||| |||||| || || || || || ||||| || || || || |||||
Sbjct 1290 AAGGAGCCAGAGAAGAAAATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAG 1349
Query 74910 GGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGG 74965
| | ||| ||| ||||| | |||||| || || || |||| |||
Sbjct 1350 GTAGAATCCTT-GTCTTGGATCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGG 1408
Query 74966 GACAGTATCGATCGCTTGGAAGAGGCTTG--CCTTCT-CTTCGGGATCCTTGACGAGCTT 75022
| || ||||| || | ||||||| || | || ||| | ||||||| | |
Sbjct 1409 AATGGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCTT---GCTCCTTGATGTATGT 1465
Query 75023 GTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTA 75082
|||||| | || ||||| ||||| | ||||| |||| | | ||| | ||||
Sbjct 1466 GTCAATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATAATTTGGAAACCGTA 1525
Query 75083 GAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAAAATTCATGTCGATATTCTCC 75140
||| | || || |||| || || || || | |||| || | || |||||
Sbjct 1526 GAAGCAGCGGGCTTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAG--GAGGTTCTCG 1583
Query 75141 ATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCA 75200
|||| || |||||||| |||||||| ||||| || || ||| |||| |||||||
Sbjct 1584 TTGACAATTCCGTCCGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCA 1643
Query 75201 TCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACC 75257
||||| ||| | |||| ||| || | |||||| | | |||||||||||| |
Sbjct 1644 TCGTCGTTGAGGCGGTTGTTCCAGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCTGCT 1703
Query 75258 GTCCAGAAACTCCCAATCGCCTTTTTGTACA 75288
||||||||| | |||||| |||||||
Sbjct 1704 GTCCAGAAAGAGGCCTCCGCCTTCTTGTACA 1734
>seq498
Length=2934
Score = 98.7 bits (108), Expect = 1e-15
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
|||||| ||||| || | ||| || |||||||||||||| |||||| |||| || | ||
Sbjct 2307 TGCTGACCGTGGAGCCTTCATTGATCAGTCCCAGTCTCTCAACATCCACATGAAGGACCC 2248
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
|| ||| |||| | | || ||||||||| || |||||| || |||||||| ||
Sbjct 2247 AACAATGGGCAAGATCACATCCATGCACTTTGCTGGCTGGAAGCTTGGCCTCAAGACCGG 2188
Query 55906 TATGTACTATCTGCGGACC 55924
|||||||| || || |||
Sbjct 2187 CATGTACTACCTCCGTACC 2169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547168939424000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |