Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq499 268 1e-66 seq977 172 6e-38 seq4873 170 2e-37 seq4907 143 3e-29 seq498 100 3e-16 seq3646 96.9 4e-15 >seq499 Length=3129 Score = 268 bits (296), Expect = 1e-66 Identities = 651/975 (67%), Gaps = 17/975 (2%) Strand=Plus/Plus Query 80794 GGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGT-AACAACCCGTGTAACATC 80852 ||||| |||| ||| |||| ||||| ||| | || ||||||| |||| || || Sbjct 10 GGGTAGTAGTTGACATCAATGATCTTGTTCAAGTT-CTTGACAACAACCTGTGTGACCTC 68 Query 80853 ATGAAGTTTCTGAAAGTCGAAT-TG--GTTCCCCTTCACAA---ATGCCGGAAGGCTCAG 80906 ||||| ||||| |||||| || || ||| || | ||| | | || ||| || Sbjct 69 GTGAAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATATCAACATACGTTGGCAGGGCAAG 128 Query 80907 GGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCA 80966 ||| |||| || |||||||| ||||| |||| | | | ||||||| || || ||||| Sbjct 129 GGATGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAATCTCTGTGCA 188 Query 80967 CAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTC 81026 | || || ||| ||||| ||||| |||||||| |||| ||||||||| || Sbjct 189 AAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATC 248 Query 81027 CTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAAT 81086 |||||| |||| | ||| | || ||||| || | || ||| |||| || ||||| Sbjct 249 CTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGAGTACCAAAG 308 Query 81087 CTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTC 81146 || | ||||||| |||||| || || || | | || | ||||| | Sbjct 309 CTTCTGGGCCTTGATGGTCTTGCGACCCTTTCCATCCCTCTCGTAGCTCTCGTAAAGCGC 368 Query 81147 GTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTG 81206 || |||| | |||| || |||| | | ||||||||||| |||||||| ||| Sbjct 369 CTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGTTGGGGCACATGAGGGT 428 Query 81207 CCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAA 81266 |||||| || ||||| ||| ||||||||| || ||||||||||| ||| ||| Sbjct 429 CCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAA 488 Query 81267 CAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCAT 81326 || ||| ||| || | ||||| | || ||||| | ||| || || || || | Sbjct 489 CAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCTAGGAACTCAAA 548 Query 81327 GATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACC 81383 || ||||| ||||||||||| | || | ||||| | || ||| |||||| Sbjct 549 GACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACC 608 Query 81384 CTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGA 81443 |||| ||||| | ||||| ||| || || || | ||| || | |||||||| || Sbjct 609 TTGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGA 668 Query 81444 CTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG--CACCTTGCTGATTGAAAGA 81501 | ||||| ||||| |||| | || |||| || || || ||| | Sbjct 669 GTTTCCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATACGATG--GATGTTCAAT 726 Query 81502 CCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCC 81561 ||||| || || | |||||| ||| ||||| || | || ||||| || ||| Sbjct 727 CCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCC 786 Query 81562 TCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG 81621 || || || || | |||||||| | |||||| ||| |||| ||||| | || Sbjct 787 TCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGTGTA 846 Query 81622 CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAG 81681 ||||||||||| |||||||||| ||||| |||| || | ||||| |||| || Sbjct 847 CCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTAT 906 Query 81682 GTTTC-CTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACAT 81740 || || ||| | | |||||| || |||||||| || | || |||||||||| ||| Sbjct 907 GTCTCGATTGTCTTCT-CAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCAT 965 Query 81741 GTACTGGGGCGTCTC 81755 || ||| ||| |||| Sbjct 966 GTGCTGCGGCCTCTC 980 >seq977 Length=6114 Score = 172 bits (190), Expect = 6e-38 Identities = 179/232 (77%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || |||||||||||||| ||||||||||| Sbjct 5220 ATGCAGATTTTCGTCAAGACCCTGACGGGAAAGACTATTACTCTCGAGGTTGAGTCTTCG 5279 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || |||||||| |||||||| || || || |||||| Sbjct 5280 GACACCATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAG 5339 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || ||||||||||||||||||||||||| | || || ||| ||||| || Sbjct 5340 CAGCGCCTGATCTTTGCTGGTAAGCAACTCGAGGATGGAAGGACGCTGAGC-GACTACAA 5398 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| ||| ||||| | || | |||||||| ||||| ||| Sbjct 5399 CATCCAGAAGGAGAGCACCCTTCACTTGGTGCTCCGTCTTCGTGGTGGCCAA 5450 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || ||| | ||||||||||| Sbjct 4536 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 4595 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || ||||||||||||||||| |||||||| |||||| Sbjct 4596 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 4655 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| ||||||||||| || ||||| | || || || | || || || Sbjct 4656 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACTCTCTCCGATTACAAC 4715 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || |||||||| | ||| | |||||||| ||||| Sbjct 4716 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGTGGTGG 4762 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| ||||| |||||||| ||||| || ||||| || ||| Sbjct 4764 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTCGAGGTGGAATCATCC 4823 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||| || ||||| ||||||||||| |||||||| |||||| Sbjct 4824 GATACTATCGACAATGTTAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 4883 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| | ||||||| || ||| | | ||||| || Sbjct 4884 CAGCGCCTGATTTTCGCAGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCGGACTACAAC 4943 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| |||||||| ||| | || | |||||||| ||||| Sbjct 4944 ATTCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTCTTCGTGGTGG 4990 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||| ||||| ||||| | ||||| ||||| Sbjct 4992 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGTTGGAGGTCGAGTCGTCG 5051 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||| |||| || || || |||||||| || || || |||||| Sbjct 5052 GATACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCAG 5111 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| ||||||||||| || ||||| || ||||||| ||||| || | || || || Sbjct 5112 CAGCGCCTAATTTTTGCGGGCAAGCAGCTAGAGGATGGCCGTACTCTGTCTGATTACAAC 5171 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| |||||| | ||||| || | ||||| |||||||| Sbjct 5172 ATTCAGAAGGAGTCCACTTTACATCTTGTTCTCCGTCTCCGCGGTGG 5218 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || |||||||| ||||| |||| ||| | || | ||| Sbjct 4332 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAACGTTAAGAGC 4391 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||| ||||||||||||||||| || |||||||| ||||| || || || || ||| Sbjct 4392 AAGATTCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 4451 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| ||||| | || ||||| | ||||| || |||| ||||| |||||||| || Sbjct 4452 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 4511 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| | ||||| || ||||| Sbjct 4512 TTGGTCCTCCGTCTGCGTGGTGG 4534 >seq4873 Length=13461 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || || ||||||||||| || |||||||| |||||| Sbjct 6385 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCATCC 6326 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || |||||||||||||||||||| || |||||| Sbjct 6325 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 6266 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || || ||||| |||||||||| || ||||| | ||||| || Sbjct 6265 CAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAAC 6206 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||||||||| | ||| || | || || || || Sbjct 6205 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTCCGTGGAGG 6159 >seq4907 Length=24529 Score = 143 bits (158), Expect = 3e-29 Identities = 141/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| | || |||||||| || || |||||||| ||||| |||| || Sbjct 4310 CTTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTAT 4369 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || || |||||||||||||||||||| ||||||||||| || Sbjct 4370 CGACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCT 4429 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || |||||||| ||||| |||||||||| || ||||| | ||||| || |||| || Sbjct 4430 GATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACCCTTTCCGACTACAACATCCAGAA 4489 Query 27594 GG 27595 || Sbjct 4490 GG 4491 >seq498 Length=2934 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || || ||||||||||| ||||||||||| ||||||||| | |||||| || Sbjct 2170 GTACGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAGCCAGCAAAGTGCATGGAT 2229 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| ||| | | ||| |||| || |||| |||||| |||||||| |||||| ||| Sbjct 2230 GTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGAGACTGGGACTGATCAATG 2289 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 || || ||||| || || ||||| Sbjct 2290 AAGGCTCCACGGTCAGCAGCCAT 2312 >seq3646 Length=8928 Score = 96.9 bits (106), Expect = 4e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 64714 CAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCT 64773 |||||||||| || || || || || || |||||||| ||||| || ||| || Sbjct 1342 CAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATTTTCTTCTCTGGCTCCTTCGCATCC 1283 Query 64774 ATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATC 64833 ||||||||||| || ||||| ||||| ||| | || || | || || |||||||| || Sbjct 1282 ATTTTCTGGCTTAAGAAGCGTGGCCTCATGGCTGGCCTTACCTTCTCTAACGAGCTCATT 1223 Query 64834 TCTCGGGACGAGGGGCTCCAC 64854 || || |||||||| |||||| Sbjct 1222 TCCCGCGACGAGGGTCTCCAC 1202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570261353305600