Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq977 131 1e-25 >seq977 Length=6114 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || |||||| | ||||| || || |||||| | ||| Sbjct 4764 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTCGAGGTGGAATCATCC 4823 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || ||||||||||| || || || || || || || Sbjct 4824 GATACTATCGACAATGTTAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 4883 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || ||||| || | ||| | || || |||||| Sbjct 4884 CAGCGCCTGATTTTCGCAGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCGGACTACAAC 4943 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | ||||||||| | ||| | || ||||| || Sbjct 4944 ATTCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTCTTCGTGGTGGTAT 4993 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | || ||| | || || || ||||| Sbjct 4536 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 4595 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || ||||| || || || || Sbjct 4596 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 4655 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || | || ||| | || | |||||||||||| Sbjct 4656 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACTCTCTCCGATTACAAC 4715 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | || ||||| | ||| | || ||||| || Sbjct 4716 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGTGGTGGTAT 4765 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||| ||||| ||| | ||||| | || || || |||| Sbjct 4992 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGTTGGAGGTCGAGTCGTCG 5051 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || ||||| || || ||||| ||||| || || Sbjct 5052 GATACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCAG 5111 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| |||| | || ||||| || | || || | || | || ||||||||| Sbjct 5112 CAGCGCCTAATTTTTGCGGGCAAGCAGCTAGAGGATGGCCGTACTCTGTCTGATTACAAC 5171 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || |||||| | ||| | ||| | || ||||| || Sbjct 5172 ATTCAGAAGGAGTCCACTTTACATCTTGTTCTCCGTCTCCGCGGTGGTAT 5221 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 |||| |||||| | || || ||||| || || | ||||| | || || | || || Sbjct 4330 TGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAACGTTAAGA 4389 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || ||||||||||| || || || || || || || || ||| | || | |||||||| Sbjct 4390 GCAAGATTCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCA 4449 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | ||| | || ||| | ||| | ||||| |||||||| || |||||||| || | | Sbjct 4450 AGCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTCC 4509 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | ||||| | ||| |||| ||||| || Sbjct 4510 ACTTGGTCCTCCGTCTGCGTGGTGGTAT 4537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434880997017600