Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq977 131 1e-25
>seq977
Length=6114
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||||| || |||||| | ||||| || || |||||| | |||
Sbjct 4764 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTCGAGGTGGAATCATCC 4823
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || ||||||||||| || || || || || || ||
Sbjct 4824 GATACTATCGACAATGTTAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 4883
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| ||||| || ||||| || | ||| | || || ||||||
Sbjct 4884 CAGCGCCTGATTTTCGCAGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCGGACTACAAC 4943
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| || | ||||||||| | ||| | || ||||| ||
Sbjct 4944 ATTCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTCTTCGTGGTGGTAT 4993
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || |||||| | || ||| | || || || |||||
Sbjct 4536 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 4595
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||| ||||| || ||||| || || || ||
Sbjct 4596 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 4655
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| || || || | || ||| | || | ||||||||||||
Sbjct 4656 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACTCTCTCCGATTACAAC 4715
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||||||||| | || ||||| | ||| | || ||||| ||
Sbjct 4716 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGTGGTGGTAT 4765
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||||| ||||| ||| | ||||| | || || || ||||
Sbjct 4992 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGTTGGAGGTCGAGTCGTCG 5051
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | ||||| || || ||||| || || ||||| ||||| || ||
Sbjct 5052 GATACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCAG 5111
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| |||| | || ||||| || | || || | || | || |||||||||
Sbjct 5112 CAGCGCCTAATTTTTGCGGGCAAGCAGCTAGAGGATGGCCGTACTCTGTCTGATTACAAC 5171
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| || |||||| | ||| | ||| | || ||||| ||
Sbjct 5172 ATTCAGAAGGAGTCCACTTTACATCTTGTTCTCCGTCTCCGCGGTGGTAT 5221
Score = 100 bits (110), Expect = 2e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069
|||| |||||| | || || ||||| || || | ||||| | || || | || ||
Sbjct 4330 TGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAACGTTAAGA 4389
Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129
|| ||||||||||| || || || || || || || || ||| | || | ||||||||
Sbjct 4390 GCAAGATTCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCA 4449
Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189
| ||| | || ||| | ||| | ||||| |||||||| || |||||||| || | |
Sbjct 4450 AGCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTCC 4509
Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| ||||| | ||| |||| ||||| ||
Sbjct 4510 ACTTGGTCCTCCGTCTGCGTGGTGGTAT 4537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434880997017600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |