Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq4873 185 2e-41
seq977 167 5e-36
seq4907 138 3e-27
seq499 120 7e-22
seq4583 84.2 5e-11
>seq4873
Length=13461
Score = 185 bits (204), Expect = 2e-41
Identities = 176/225 (78%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| ||||| ||||| | ||||||||||||||| || |||||||| || |||| |||
Sbjct 6161 TCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAG 6220
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
||| | ||||| || ||||||||||| |||||||| | ||| || ||||| || ||||
Sbjct 6221 GGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAAT 6280
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
||| ||||||||||||||||| || || || ||||| ||||| || || |||||
Sbjct 6281 TCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCCACCTC 6340
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| ||||| || ||||| || || | |||||
Sbjct 6341 AAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 6385
>seq977
Length=6114
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| | ||||||||| ||||| || || ||||| ||||| | || ||
Sbjct 4757 ACGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGAGAGAGT 4698
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || |||||||| || ||||| || ||||| || ||||| ||||||| ||
Sbjct 4697 GCGGCCGTCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCC 4638
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| ||||| || ||||| ||||||||||| || |||||||| |
Sbjct 4637 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCCAA 4578
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| ||||| || ||||| ||||| || || | ||||||
Sbjct 4577 AGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 4536
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | || ||||||||||| || || ||||| || |||| | |||
Sbjct 4985 ACGAAGACGGAGAACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGT 4926
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| |||| ||||||||||||||| || ||||| || ||||| ||||||| ||
Sbjct 4925 GCGGCCATCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACC 4866
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| || ||||| || || || ||||| || || || ||| ||||||||
Sbjct 4865 CTCCTTGTCTTGAATCTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCACCTCGAG 4806
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||| ||||| |||||||| ||||| | ||||||
Sbjct 4805 CGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | |||||| ||| ||| || |||||||| || || || ||
Sbjct 5441 ACGAAGACGGAGCACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGT 5382
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||||||||| || || ||||| || || ||||| ||||| || ||||| || || | ||
Sbjct 5381 CCTTCCATCCTCGAGTTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACC 5322
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| ||||| ||||| || ||||| || |||||||| || |||||||||||
Sbjct 5321 CTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAG 5262
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || ||||||||||| || ||||| || || | ||||||
Sbjct 5261 AGTAATAGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 5220
Score = 141 bits (156), Expect = 2e-28
Identities = 144/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| ||||||||||| || |||||||| || || | ||||| | || ||
Sbjct 4519 AGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 4460
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || |||||||| |||||||| || ||||| ||||| || |||| ||| ||||||||
Sbjct 4459 TCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCT 4400
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| |||||||| || ||| || ||||| || ||||| |||
Sbjct 4399 TGAATCTTGCTCTTAACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTC 4340
Query 211083 TTTCCCGT 211090
|| || ||
Sbjct 4339 TTGCCAGT 4332
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || | ||||||||| || || ||||| ||||| | || || | |||||
Sbjct 5203 AGAACAAGATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAGACAGAGTACGGCCATCC 5144
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || || || ||||| || ||||| || || | || ||||| ||
Sbjct 5143 TCTAGCTGCTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 5084
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| |||||||| || || || ||||| | || || |||
Sbjct 5083 TGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACCTCCAACGTAATTGTC 5024
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||||||||| || || | |||||
Sbjct 5023 TTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 4992
>seq4907
Length=24529
Score = 138 bits (152), Expect = 3e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | |||||| | |||||| || ||||||||||| || |||||
Sbjct 4489 TTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 4430
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| ||||||| ||| |||||||| |||||||| || || || |||
Sbjct 4429 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 4370
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| || || ||| || ||||| || ||||| ||||| ||||| | ||||| || ||
Sbjct 4369 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 4311
>seq499
Length=3129
Score = 120 bits (132), Expect = 7e-22
Identities = 193/276 (70%), Gaps = 6/276 (2%)
Strand=Plus/Plus
Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||||||||| | ||||| ||||| |||||| ||||| || ||||
Sbjct 216 GTTCTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTACAGCATGAAAGGGTTTCC 272
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||||| ||||||| |||||||| | |||||||| |||||| || |||||
Sbjct 273 TGTCTCAGTTTGAGCCTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATGGTCTTGCG 332
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| ||||| || ||||||| | | ||| ||| |||| || || || || || ||
Sbjct 333 ACCCTTTCCATCCCTCTCGTAGCTCTCGTAAAGCGCCTCAAACTCATCGCCGTAAACGTC 392
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| | | || || ||| |||||||| | ||| |||| | ||||| | || || ||
Sbjct 393 AGCCAACCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACG 452
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
||||||||||| || | | |||||| || |||||
Sbjct 453 CTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAA 488
>seq4583
Length=8960
Score = 84.2 bits (92), Expect = 5e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 139806 CCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAA 139865
||| |||||||||||||| | || || || || ||||| ||||| | | || || |
Sbjct 4442 CCTCCCAAAGAAGCACGGTCGTGGTGGTCAGTCCGCTCTCCGTTTCGCCCGTCTCCGTGA 4383
Query 139866 GGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAA 139925
||| ||| | |||||||| | | ||||| || || ||| |||| || ||||
Sbjct 4382 GGAGAAGCGTCACAACTATGTCCGCAAAGTCGCCGAATTGGCAGTACAAAACTTCATCAC 4323
Query 139926 AGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGA 139981
|| ||||| | |||| | |||||| | ||||| |||||||| || |||||||
Sbjct 4322 CAACGACAAGGTTAATGTTGCCGGTATTATCTTGGCTGGTTCCGCTGATTTCAAGA 4267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159049820751200
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