Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq499 176 6e-39
seq3646 109 8e-19
>seq499
Length=3129
Score = 176 bits (194), Expect = 6e-39
Identities = 406/612 (66%), Gaps = 0/612 (0%)
Strand=Plus/Plus
Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984
||||| ||||| || |||| ||| |||| |||||||| || || |||||||| | | |
Sbjct 370 TCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGTTGGGGCACATGAGGGTC 429
Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044
|||||||| | | || ||| || ||||| |||||||| || ||||| ||||| ||
Sbjct 430 CAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAAC 489
Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104
| || |||| | ||| || || || |||||| | | || || ||||| |
Sbjct 490 AAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCTAGGAACTCAAAG 549
Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164
| ||| | |||||||| || | || || || | | | ||||| || || || || ||
Sbjct 550 ACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCT 609
Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224
|| || | ||||| || ||||| || | || | | ||| |||| ||||| || ||
Sbjct 610 TGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGAG 669
Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284
|||| || || |||| || || ||| | || || ||| | ||| | ||
Sbjct 670 TTTCCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCG 729
Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344
|| ||||| || |||| || || | || || || | ||| || |||||||||||
Sbjct 730 ATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCA 789
Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404
|||||||| ||| |||||| | | || ||| |||| ||| || || ||
Sbjct 790 ATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGTGTACCG 849
Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464
||||| || | ||| || || || || || || |||| ||| | || ||||||||
Sbjct 850 GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTC 909
Query 78465 TCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGC 78524
|| || | || || ||| ||||| || ||||| |||||||| | ||| |||
Sbjct 910 TCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCATGTGC 969
Query 78525 TGAGGTCTTTCA 78536
|| || || |||
Sbjct 970 TGCGGCCTCTCA 981
>seq3646
Length=8928
Score = 109 bits (120), Expect = 8e-19
Identities = 339/520 (65%), Gaps = 16/520 (3%)
Strand=Plus/Plus
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
|||||||| || || || || | ||| || ||||| || || ||||| || || | |||
Sbjct 1230 TCGTTAGAGAAGGTAAGGCCAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCG 1289
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302
|| || ||||| ||||| || || || ||||| || || || || | || || |
Sbjct 1290 AAGGAGCCAGAGAAGAAAATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAG 1349
Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359
| | || |||| | ||||||| |||||||| ||||||||||| | |||||
Sbjct 1350 GTAGAATCCTTGTCTTGGATCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGGA 1409
Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCA--TTGCTATCTTTAACGTAAGTAT 48417
|| || || || ||||| ||||| | | || | |||| || || | ||| || |
Sbjct 1410 ATGGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCTTGC--TCCTTGATGTATGTGT 1467
Query 48418 CTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAA 48477
| || | || || | |||| |||||| || || || || || || ||||| |
Sbjct 1468 CAATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATAATTTGGAAACCGTAGA 1527
Query 48478 AACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTA 48537
| || | ||||||| ||| || ||||| | | || || || | ||||| || |
Sbjct 1528 AGCAGCGGGCTTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGA 1587
Query 48538 CTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATA------TTTTT 48591
| ||||| || || || || || || | || || || || || | |
Sbjct 1588 CAATTCCGTCCGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGT 1647
Query 48592 CGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTG 48651
||||| || | | || |||||||| | || || || || | ||| | || || ||||
Sbjct 1648 CGTTG--AGGC-GGTTGTTCCAGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCTGCTG 1704
Query 48652 TCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
|||| || || ||||| || || || ||||| | ||| ||
Sbjct 1705 TCCAGAAAGAGGCCTCCGCCTTCTTGTACATCTGCCAGAT 1744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694609058483200
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