Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq4873 129 1e-24
seq977 113 1e-19
>seq4873
Length=13461
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
|||||| ||||| | |||||||| ||||| || ||||||||||| || | | || |
Sbjct 6167 GAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCG 6226
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || ||||||||||| | | ||||||||||| | ||||| ||
Sbjct 6227 GCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATTCCCTC 6286
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || |||||| | || | |||| || ||| || ||||| ||
Sbjct 6287 CTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCCACCTCAAGGGT 6346
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| |||||||| || ||||||||||||| |||||
Sbjct 6347 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 6385
>seq977
Length=6114
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | |||||||| ||||| || || ||||||||||||| | ||| | || ||
Sbjct 4747 AGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCC 4688
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || ||||| || || | ||||||||||| | || || ||||| ||
Sbjct 4687 TCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 4628
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || ||||| | || | | |||| || ||| || || | ||| || ||
Sbjct 4627 TGAATCTTGGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTC 4568
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||| ||||||| ||||||
Sbjct 4567 TTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 4536
Score = 111 bits (122), Expect = 4e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| |||||||| | ||| ||||| || || ||||||||||| | | ||| |
Sbjct 5210 GAGACGGAGAACAAGATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAGACAGAGTACG 5151
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| ||||| || || || || || || | ||||||||||| | ||| || ||
Sbjct 5150 GCCATCCTCTAGCTGCTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTGGGATGCCCTC 5091
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| ||||| || || ||||| | || | | | || || ||| || || | ||
Sbjct 5090 CTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACCTCCAACGT 5031
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || || ||||||||||| ||||||| |||||
Sbjct 5030 AATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 4992
Score = 111 bits (122), Expect = 4e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || ||| || ||||||||||| ||| | || || ||||| || |
Sbjct 5426 CAAG-TGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTTCCATCCTCGA 5368
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || ||||| || | ||||||||||| | ||| || ||||| || ||||
Sbjct 5367 GTTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAA 5308
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | | |||| ||| ||| || || ||||||||||| || |
Sbjct 5307 TCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATAGTCTTTC 5248
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| || ||||| ||||| | ||||||
Sbjct 5247 CCGTCAGGGTCTTGACGAAAATCTGCAT 5220
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| ||||| ||||| || || |||||||| || | || || | |||||
Sbjct 4976 GAGAACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGGCCATC 4917
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| | || || ||||| || || | ||||||||||| | || || ||||| ||
Sbjct 4916 CTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTC 4857
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|||||| || || ||| | || | | || || || || || || ||||| ||
Sbjct 4856 TTGAATCTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCACCTCGAGCGTAATCGT 4797
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||||||| |||||||| || || | ||||||
Sbjct 4796 CTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Score = 84.2 bits (92), Expect = 5e-11
Identities = 132/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| | || ||||| ||||| || ||||||||||| |||| | || | || ||
Sbjct 4520 GAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 4461
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| || | |||||||||| | ||||| ||||| ||
Sbjct 4460 CTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTC 4401
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|||||| || || || | || | | | || || ||| || ||||| || || ||
Sbjct 4400 TTGAATCTTGCTCTTAACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGT 4341
Query 152072 TTTGCCCGT 152080
||||| ||
Sbjct 4340 CTTGCCAGT 4332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153719090696480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |