Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq4873 152 4e-32
seq977 134 1e-26
seq4907 102 6e-17
>seq4873
Length=13461
Score = 152 bits (168), Expect = 4e-32
Identities = 168/222 (76%), Gaps = 4/222 (2%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||| |||| |||||| ||| |||||| ||||||||||| || | || |||
Sbjct 6168 AGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 6227
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || || |||||||| ||||| |||||||| |||||||| || | || | || |||
Sbjct 6228 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATTCCCTCC 6287
Query 44240 TTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCG 44297
|| ||| ||||| ||| || ||| | || ||||||| || |||||||| | |
Sbjct 6288 TTGTCCTGGATCTTGGACTTGACATTGT--CGATAGTGTCGGATGACTCCACCTCAAGGG 6345
Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339
| || ||||| ||||| |||||||||||||||||||||||||
Sbjct 6346 TGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGA 6387
>seq977
Length=6114
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| || |||||| || ||||||||||||| ||| ||| |||| ||
Sbjct 4744 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCCTCA 4685
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || || |||| |||||||| || | ||| | || ||||| |||
Sbjct 4684 AGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 4625
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| || || ||||||| || || |||||
Sbjct 4624 ATCTTGGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 4565
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||||||| |||||||| |||||
Sbjct 4564 CCAGTGAGGGTCTTAACGAAGATCTGCAT 4536
Score = 127 bits (140), Expect = 1e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| |||||| ||||||||||| ||||||||||| ||| || | | || ||
Sbjct 5429 CACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTTCCATCCTC 5370
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| ||||| || |||||||||| |||||||| || | || | ||| ||||| |||
Sbjct 5369 GAGTTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 5310
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | |||||||| | || || ||||| | ||||| |||||
Sbjct 5309 AATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATAGTCTT 5250
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| |||||||| ||||| || |||||
Sbjct 5249 TCCCGTCAGGGTCTTGACGAAAATCTGCAT 5220
Score = 109 bits (120), Expect = 4e-19
Identities = 154/212 (73%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187
|||| || || ||| |||||| || |||||||| || | | || || || | || ||
Sbjct 4972 ACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGGC-CATCCTC 4914
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| |||||| || || || |||| |||||||| || | ||| | ||| ||||| ||
Sbjct 4913 CAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTG 4854
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | || || |||| ||||||||||| | ||||||||||
Sbjct 4853 AATCTTGCTCTTAACATTGT--CGATAGTATCGGATGATTCCACCTCGAGCGTAATCGTC 4796
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || ||||| || || || |||||
Sbjct 4795 TTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| || ||||||||||| | || || | || || |||||||| || |||||
Sbjct 5183 CTCCTTCTGAATGTTGTAATCAGACAGAGTACGGCCATCCTCTAGCTGCTTGCCCGCAAA 5124
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|| | |||||||| || | || | || ||||| || ||||| ||| | |
Sbjct 5123 AATTAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTAGACTTGACGTT 5064
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| ||||| || | || || ||||||| |||||| |||||||| ||||| ||||| ||
Sbjct 5063 ATCGATGGTATCCGACGACTCGACCTCCAACGTAATTGTCTTTCCGGTGAGAGTCTTGAC 5004
Query 44326 GAAGATTTGCAT 44337
||||||||||||
Sbjct 5003 GAAGATTTGCAT 4992
Score = 95.1 bits (104), Expect = 9e-15
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || ||| |||||| ||||||||||| |||| ||| ||| |||| ||
Sbjct 4516 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 4457
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| ||||||| ||| ||||| || | || | || ||||| ||
Sbjct 4456 AGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGA 4397
Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| || ||| | ||||| |||| ||| || ||||| | || || |||||
Sbjct 4396 ATCTTGCTCTT-AACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTT 4338
Query 44308 TCCCGT 44313
|| ||
Sbjct 4337 GCCAGT 4332
>seq4907
Length=24529
Score = 102 bits (112), Expect = 6e-17
Identities = 134/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| |||| || ||| | || || |||||||| || |||||||
Sbjct 4491 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 4432
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| |||||||| || | ||| | || ||||| || |||||| ||| || |||
Sbjct 4431 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 4372
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || || |||| ||| || ||||| | || || ||||| ||||| | |||||| ||
Sbjct 4371 --CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 4314
Query 44326 GAAG 44329
||||
Sbjct 4313 GAAG 4310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359960214804960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |