Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq4873 150 4e-31
seq977 136 1e-26
seq4907 125 2e-23
>seq4873
Length=13461
Score = 150 bits (166), Expect = 4e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || || || || || || |||||||| |||||||| || |||
Sbjct 6382 CAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCATCCGAC 6323
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| ||||| |||||||| || ||||| || |||||||||||
Sbjct 6322 ACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 6263
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || |||||||| ||||| | || ||| | || || ||| ||
Sbjct 6262 CGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAACATC 6203
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || || || | || ||||||||
Sbjct 6202 CAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTC 6167
>seq977
Length=6114
Score = 136 bits (150), Expect = 1e-26
Identities = 143/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || || || ||||| || || || |||||||| || || |||
Sbjct 5223 CAGATTTTCGTCAAGACCCTGACGGGAAAGACTATTACTCTCGAGGTTGAGTCTTCGGAC 5282
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||||||||| || || || ||||| |||||||||||
Sbjct 5283 ACCATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAGCAG 5342
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || || ||||| ||||||||||| || ||| || ||| ||
Sbjct 5343 CGCCTGATCTTTGCTGGTAAGCAACTCGAGGATGGAAGGACGCTGAGCGACTACAACATC 5402
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 5403 CAGAAGGA 5410
Score = 132 bits (146), Expect = 1e-25
Identities = 153/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || ||||| | ||||| || || |||
Sbjct 4539 CAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCCGAC 4598
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||||||||||| || || || ||||||||||||||
Sbjct 4599 ACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 4658
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || ||||| || || || | ||||| ||||||| ||| |
Sbjct 4659 CGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACTCTCTCCGATTACAACATT 4718
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 4719 CAGAAGGAGTCGACTCTTCA-CTTG 4742
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || |||||||| ||||| || || || | ||||| || || ||
Sbjct 4995 CAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGTTGGAGGTCGAGTCGTCGGAT 5054
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| || || || || || ||||| |||||||||||
Sbjct 5055 ACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCAGCAG 5114
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || || || || ||||| || ||||| | ||||| | ||||| ||| |
Sbjct 5115 CGCCTAATTTTTGCGGGCAAGCAGCTAGAGGATGGCCGTACTCTGTCTGATTACAACATT 5174
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || | |||||||||
Sbjct 5175 CAGAAGGAGTCCACTTTACATCTTGTT 5201
Score = 122 bits (134), Expect = 2e-22
Identities = 138/184 (75%), Gaps = 1/184 (1%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || |||||||| ||||| || ||| || |||||||| ||||| ||
Sbjct 4332 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAACGTTAAGAGC 4391
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|||||||| ||||| || ||||| || |||||||||||||| || ||||||||||| ||
Sbjct 4392 AAGATTCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 4451
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
|| || || || || | || || |||| || ||| |||| || || || || || ||
Sbjct 4452 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTCCA- 4510
Query 178125 CTTG 178128
||||
Sbjct 4511 CTTG 4514
Score = 120 bits (132), Expect = 7e-22
Identities = 153/208 (74%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || ||||| || || || ||||| || |||||||||||| || ||
Sbjct 4767 CAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTCGAGGTGGAATCATCCGAT 4826
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || |||||||| ||||| || || || ||||||||||||||
Sbjct 4827 ACTATCGACAATGTTAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAGCAG 4886
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| || || ||||| || || ||| | || ||||| | || |||| | || || ||| |
Sbjct 4887 CGCCTGATTTTCGCAGGCAAGCAGTTGGAGGATGGCCGCAC-CTTGTCGGACTACAACAT 4945
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || |||||| | |||
Sbjct 4946 TCAGAAGGAGTCCACTCTGCATTTGGTT 4973
>seq4907
Length=24529
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || | || || || || |||||||| ||||| || ||| || || |||
Sbjct 4311 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 4370
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| || ||||| || ||||| |||||||||||||| || ||
Sbjct 4371 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCTG 4430
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||| || || || |||||||| |||||| | || ||| |||| || ||| |||| ||
Sbjct 4431 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACCCTTTCCGACTACAACATCCAGAA 4489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203625091094720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |