Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq4873 156 4e-33
seq977 152 5e-32
seq4907 118 1e-21
>seq4873
Length=13461
Score = 156 bits (172), Expect = 4e-33
Identities = 163/212 (77%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|||| || || ||| ||||||||| ||||| ||||| || |||||||| | || |||
Sbjct 6177 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCG 6236
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||||||||||||||| |||| |||||| ||||||| ||||| | |||||||||| |
Sbjct 6237 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 6296
Query 41774 ATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831
|| || ||| || | || | ||||||| ||||||||||| | || || || |
Sbjct 6297 ATCTTGGACTTGACATTGTCG--ATAGTGTCGGATGACTCCACCTCAAGGGTGATAGTCT 6354
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| |||||||| ||||| ||||| || ||||||
Sbjct 6355 TGCCCGTCAGGGTCTTCACGAAGATTTGCATG 6386
>seq977
Length=6114
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||||||||||||| || ||||||
Sbjct 4762 CCACCACGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGAG 4703
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| || |||||||| || ||||| ||||||||||| ||||||| |||
Sbjct 4702 AGAGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 4643
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| | || | | ||| | | | |||||| |||||| ||
Sbjct 4642 ATGCCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCGATGGTGTCGGACGACTCAAC 4584
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || || || || || || || ||||| ||||| ||||||||
Sbjct 4583 CTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 4536
Score = 150 bits (166), Expect = 2e-31
Identities = 174/229 (76%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| |||||| ||| ||||||||||||||| ||||| ||
Sbjct 4990 CCACCACGAAGACGGAGAACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGAC 4931
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || || | ||||||||| ||||| ||||||||||| ||||||| |||
Sbjct 4930 AAGGTGCGGCCATCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 4871
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||||| | ||| | ||||| | ||| | | | ||| ||| || ||||
Sbjct 4870 ATACCCTCCTTGT-CTTGA-ATCTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCA 4813
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | ||| ||||| || ||||| || ||||| || |||||||||||
Sbjct 4812 CCTCGAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | ||||| || || |||||||||||||| ||||| ||||||
Sbjct 5447 GCCACCACGAAGACGGAGCACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCT 5388
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || | | || ||||| ||||| || || || ||||||||||| ||||||| ||
Sbjct 5387 CAGCGTCCTTCCATCCTCGAGTTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGG 5328
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||| ||| ||| | || | | ||| | | | ||||| ||||| |
Sbjct 5327 GATACCCTCCTTATCC-TGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAA 5269
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || || || |||||||| ||||| ||||||||||||||
Sbjct 5268 CCTCGAGAGTAATAGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 5220
Score = 120 bits (132), Expect = 3e-22
Identities = 107/134 (80%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || ||| ||||||||| ||||| |||||||||
Sbjct 4534 CCACCACGCAGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 4475
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || || |||||||||||||| ||||| || || ||||||| ||||
Sbjct 4474 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 4415
Query 41756 ACGCTCTCCTTGTC 41769
| | |||||||||
Sbjct 4414 ATTCCCTCCTTGTC 4401
Score = 113 bits (124), Expect = 4e-20
Identities = 165/232 (71%), Gaps = 10/232 (4%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | || ||||| | ||| ||||||||||||||| || || ||
Sbjct 5218 CCACCGCGGAGACGGAGAACAAGATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAGAC 5159
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || || ||||||||||| || || || |||||||| ||||||| ||
Sbjct 5158 AGAGTACGGCCATCCTCTAGCTGCTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTGGG 5099
Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACT 41810
| || |||||| || ||| || ||| | | | ||| | || || |||||
Sbjct 5098 ATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATG-----GTATCCGACGACT 5044
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||||| ||| || || || || || || ||||| ||||| || |||||
Sbjct 5043 CGACCTCCAACGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 4992
>seq4907
Length=24529
Score = 118 bits (130), Expect = 1e-21
Identities = 137/183 (75%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||||| |||||||| | || |||||||||||||| || || |
Sbjct 4491 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 4432
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
|||||||||| ||||||| |||| | ||||||||| ||| || ||| || |
Sbjct 4431 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 4372
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | ||| ||| ||||| ||||| | || || || || ||||||| ||||| ||
Sbjct 4371 CG--ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 4314
Query 41851 GAA 41853
|||
Sbjct 4313 GAA 4311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462264241856000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |