Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2445 127 4e-24
seq1055 89.7 1e-12
>seq2445
Length=7783
Score = 127 bits (140), Expect = 4e-24
Identities = 142/187 (76%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 230452 GGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGT 230510
||||||||||| ||||| ||| || |||||||||||||| |||||| | | | |
Sbjct 683 GGCATGAACGC-CAACTTGATGAAGCAATACATCGAATTCGTCGCCGACAGGCTGCTGCT 741
Query 230511 TGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCAT 230570
| | || ||| ||||||| | ||||| |||| |||||||||| || |||||| |||
Sbjct 742 TTCCCTCGGTAACGAGAAGTTCTACAAGTCTACCAACCCCTTTGACTTCATGGAGAACAT 801
Query 230571 TTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGG 230630
|| || ||| ||||||||||||||||| ||||||||| ||||| || | | ||||
Sbjct 802 CTCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCCGACTACCAAAAGACTGG 861
Query 230631 TGTGATG 230637
||| |||
Sbjct 862 TGTCATG 868
>seq1055
Length=38570
Score = 89.7 bits (98), Expect = 1e-12
Identities = 196/294 (67%), Gaps = 0/294 (0%)
Strand=Plus/Plus
Query 319374 GTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTT 319433
|||||||||| | ||||| || ||| |||||||||| || || ||||||||
Sbjct 20823 GTAGTAACTCTTGGCCTCGGGCTTCTGCTTGACGAACTCGGCCAAGTTACCCTTGTAGCA 20882
Query 319434 CTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCC 319493
|||||| ||| ||||| ||| ||| ||||| || | |||||||| ||
Sbjct 20883 GGCCAGCTTCTTTCCAGGCTCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGGAAGCC 20942
Query 319494 GGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAA 319553
||||||||| || || || | | | | || | || | ||||||| || |
Sbjct 20943 GGAGTCGTGAGAAACGATGAGAGAAGTGATCTCGGTGTGGGTCTTCAGGTAATCCTGGAG 21002
Query 319554 CCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGC 319613
|||| | ||||| | || | ||||| || || ||||| | || || | | ||
Sbjct 21003 CCACTTAACGTTGGCAACGTCCAAGTGGTTAGTAGGTTCGTCCAAGAGGAGAACATCAGC 21062
Query 319614 GTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667
|||| |||||| || | ||||||||||| ||||| ||||| || ||||| ||
Sbjct 21063 CTTCATGAGCATAGCTCTGGCAAGAGCGAGCTTCATCTTCCATCCACCGGACAG 21116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057776102390420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |