Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1315 134 2e-26 >seq1315 Length=3890 Score = 134 bits (148), Expect = 2e-26 Identities = 195/275 (71%), Gaps = 8/275 (3%) Strand=Plus/Minus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 |||||||| |||||||||||| ||| || ||||||| |||||||||| ||| |||||| Sbjct 295 AGCTGGTCGACGCCCTGCCCCGTGTAGTCAGTCTTGGCGTCCACGTACTTGGCGCCGAAG 236 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC----GGGCTCCCTGTGCCCCAG 146111 || | ||||||||| || || ||||| || || || || || ||||| || Sbjct 235 TGACGCCACTGGAATCCATACACGGGGCCGAGATCACCCTCAACGCGATCTGTG----AG 180 Query 146112 CCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGC 146171 ||| | ||||| | | || || |||||| ||||||||||||||| ||| Sbjct 179 CCCAATGCTATCGAGGTAAGCGCGCGATCCGTTGCCGTCCCAGATCTTGATGCCGGCACT 120 Query 146172 GGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCC 146231 |||||| | || ||||| || ||||| |||||||| ||||| ||||||| | Sbjct 119 GGAGAGGGGAAGTGATGAGGTGGAGCCGCTGATAAACCAGAGGAGCTCGGCGAGGACGGC 60 Query 146232 CCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | |||||| | |||||| || || ||||||| Sbjct 59 GCGGAGGAAGACGCGCTTGGTTGTGAGGAGGGGGA 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590050733357360