Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2445 354 8e-93
seq335 127 2e-24
seq1054 120 3e-22
>seq2445
Length=7783
Score = 354 bits (392), Expect = 8e-93
Identities = 567/807 (70%), Gaps = 13/807 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| || ||||| |||||||| | |||||| | |||||
Sbjct 8 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACCTC 67
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
||||||||| ||||||| | || | || ||| | |||||| | ||||||
Sbjct 68 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAATGACGATGAGCGCTACTTCATCTCC 127
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| || || || |||||||| ||||| || ||||||||||| || |||||||
Sbjct 128 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTTCTCGAGCGC 187
Query 116813 TTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| ||| ||||| || | | ||||| || ||||||||||| || || ||| ||
Sbjct 188 TTCAG-CAGTGAGGTCCAAATCCCAGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGAT 246
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931
|||||| | ||| | || | || || |||||||||||| ||| | | | |
Sbjct 247 CGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACAT---CAAGGAGCA 303
Query 116932 GGAGAAGCTCCGTT---TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988
|| ||| | | | || || ||||||||||| || || ||| |||| |||||||
Sbjct 304 GGCCCAGCGCACATACCTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGC 363
Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048
||| ||||| | | |||||| | || || || |||| | | |||||||||| ||
Sbjct 364 CGACTGGGCTGTCAGGTGGATCCAAGACAAGGATTCCACCTTTGCCCAGCGCCTGGTTGC 423
Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108
|||||| ||||| ||||| ||||||| || ||| |||||| | || || ||||||||
Sbjct 424 CTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAA 483
Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168
||| || || |||||| | |||||||||||| |||||||||||||||| | || |||||
Sbjct 484 GAAGCGTGGTCTCATGGCTGGCCTGACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGG 543
Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC 117228
||| || ||||| ||||| | || ||| || | || || || ||| |
Sbjct 544 TCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCACCTTAGACACCGCCCAAGCAAGCA 603
Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGC 117288
| ||| ||| || ||||||| || ||||| |||||||| ||| | || || ||
Sbjct 604 GGCTGTCCAGGATGTCATCACCGAGGCTGTCGCGATCGAGCAAGAGTTCTTGACAGAGGC 663
Query 117289 GCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCG 117347
|| || ||||| ||||| || | || | | |||| |||||||||||| ||||
Sbjct 664 ACTCCCATGTGCG-CTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATCGAATTCG 722
Query 117348 TCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGC 117407
||||||||||||||||||| || | || ||| |||||| | |||||||
Sbjct 723 TCGCCGACAGGCTGCTGCTTTCCCTCGGTAACGAGAAGTTCTACAAGTCTACCAACCCCT 782
Query 117408 TGGACTTTATGAACCTCATCTCCTTGG 117434
| ||||| ||| | ||||||| |||
Sbjct 783 TTGACTTCATGGAGAACATCTCCCTGG 809
>seq335
Length=36749
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || |||||||| || |||||| | || || || | ||
Sbjct 30202 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 30261
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | ||||| || || | ||||| ||||| || ||| ||||||||
Sbjct 30262 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 30321
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| ||||| ||||| || || | |||||||| |||||||||
Sbjct 30322 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAAC 30381
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| |||| || ||
Sbjct 30382 ATCCAGAAGGAGTCCACCCTTCA 30404
>seq1054
Length=16682
Score = 120 bits (132), Expect = 3e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773
|| ||||| ||||||||| | || ||||| || |||| | | | | | | |||
Sbjct 2148 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAATGTTAAGAGC 2089
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| || | ||||| ||||| |||||| ||||||||||||| || |||| ||| || ||
Sbjct 2088 AAGATCCAAGACAAGGAGGGAATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAAAG 2029
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
|| || || |||| ||||||||| |||||||||||||||||||||| | || || ||
Sbjct 2028 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTCA 1970
Score = 111 bits (122), Expect = 2e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || ||||| || || || || || | || ||||| | |
Sbjct 1488 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 1429
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| ||||| || |||| || || ||||||||||| |||||||
Sbjct 1428 GATACCATCGATAACG-TCAAGTCCAAGATTCAAGATAAGGAGGGCATCCCACCGGACCA 1370
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || || | ||||||||| ||||| || |||| || || | || |||||
Sbjct 1369 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGCCGTACTTTGTCTGATTACAA 1310
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| |||| | ||||| ||
Sbjct 1309 CATCCAGAAGGAGTCCACATTACATCTTGT 1280
Score = 105 bits (116), Expect = 7e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || ||||| |||||||| | || ||||| | ||
Sbjct 1944 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTCGAGTCGTCC 1885
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | ||| || |||| || || |||||||| || ||||||||
Sbjct 1884 GACACCATCGACAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCGGACCAG 1825
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || || | ||| || || ||| |||| || | ||||| || ||||||||||
Sbjct 1824 CAGCGCCTGATTTTCGCAGGAAAGCAGTTGGAGGATGGTCGCACTCTGTCCGACTACAAC 1765
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|| ||||||||| | || || ||
Sbjct 1764 ATTCAGAAGGAGTCGACTCTCCA 1742
Score = 91.5 bits (100), Expect = 2e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || || || ||||| || |||| || || | |
Sbjct 1260 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCTTCT 1201
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || || | || || ||||| ||||| |||||||
Sbjct 1200 GACACCATTGACAACG-TCAAGTCGAAGATCCAGGATAAGGAGGGTATCCCACCGGACCA 1142
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| || || || ||||| || || | | | || || | |||||||||
Sbjct 1141 GCAGCGCCTGATCTTTGCCGGGAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTACAA 1082
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| ||| || ||
Sbjct 1081 CATCCAGAAGGAGAGCACTCTTCA 1058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515196440191840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |