Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1054 136 3e-27
seq335 116 3e-21
>seq1054
Length=16682
Score = 136 bits (150), Expect = 3e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || ||||| || ||||||||||| ||| || |||||| ||||||
Sbjct 1735 CACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCATCCTC 1794
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
| ||| ||||| ||| | || || |||||||| || ||||| ||||||||||| ||
Sbjct 1795 CAACTGCTTTCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTG 1854
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | |||| |||||| | ||||||||| | || | || ||
Sbjct 1855 AATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTT 1914
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| ||||| || || || |||||||||||
Sbjct 1915 GCCAGTCAGGGTCTTGACGAAAATCTGCAT 1944
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | || |||||| || | || ||||| || |||||||||||||||
Sbjct 1488 TACCACCACGCAGACGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGG 1547
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||||| |||||| ||||| || ||||| |||| || |||||||| || ||||
Sbjct 1548 ACAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAG 1607
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || |||||||| ||| ||| || || || | || | ||| || | || | ||
Sbjct 1608 GAATACCCTCCTTATCTTGAATCTTCGACTTTACGTTGTCAATGGTATCGGATGAT-TCC 1666
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| | || | ||| || || || || || || || |||||||||||
Sbjct 1667 ACCTCAAGCGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716
Score = 102 bits (112), Expect = 7e-17
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| || | ||| ||||| || || ||||||||||| || ||| || |||||||
Sbjct 1281 CAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCGTCCTCGA 1340
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| || || ||| | || || |||||||| || || || ||||||||||| ||| ||
Sbjct 1341 GCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGAA 1400
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | |||| ||| |||| |||||| || | || | || || |
Sbjct 1401 TCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTC 1460
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| ||||| || || || || |||||
Sbjct 1461 CGGTGAGAGTCTTGACGAAGATTTGCAT 1488
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||| || || |||||||| ||||||| || | | ||||||
Sbjct 1051 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 1110
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || || |||| || |||||||| || || || || |||||||| ||
Sbjct 1111 GAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 1170
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | || | |||||| | ||| ||||||| || | || ||
Sbjct 1171 GATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTT 1230
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| || || ||||||||||||||
Sbjct 1231 TCCAGTCAAGGTCTTGACAAAAATCTGCAT 1260
Score = 98.7 bits (108), Expect = 9e-16
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || || |||||||| ||| | ||||| |||||
Sbjct 1964 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 2023
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || ||||| ||| |||| ||||| ||||| || || || || ||||||||||||
Sbjct 2024 AGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGG 2083
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||||| | |||| ||| || | | ||||||||| | ||| | || |||
Sbjct 2084 ATCTTGCTCTTAACATTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 2143
Query 118710 CCGGTCA 118716
|| ||||
Sbjct 2144 CCAGTCA 2150
>seq335
Length=36749
Score = 116 bits (128), Expect = 3e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
|||||| || | |||||| |||||||| | || ||||| || || |||||||| ||
Sbjct 30429 ACCTCCACGAAGTCTCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 30370
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| ||||| |||||||||||| || || ||| |||| || |||||||| || || ||
Sbjct 30369 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 30310
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| ||||||||||| || || || || | |||| ||||| | ||| ||
Sbjct 30309 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCAC 30250
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||| | ||| | || ||||| ||||| || || || || || |||||| ||
Sbjct 30249 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 30198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433811714653528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |