Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1306 95.1 3e-14 >seq1306 Length=24320 Score = 95.1 bits (104), Expect = 3e-14 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 ||| ||||| | |||| || | || || ||||||||||||| ||||||| || ||||| Sbjct 1193 CTGCCCGCCGTACAAGATCATCATTCTCGACGAGGCGGACAGCATGACGCAGGATGCGCA 1252 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320 | ||| || ||||| |||||||||||| | | ||||| || || ||||||| Sbjct 1253 GAGCGCGCTGCGCCGCACGATGGAGACGTATAGTAAGATCACGCGGTTCTGTTTGGTGTG 1312 Query 254321 CAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377 ||||| || || ||| || | || ||||| ||||||| |||||||| || Sbjct 1313 TAACTATGTTACGCGGATTATTGATCCCCTGGCGAGTCGGTGCAGTAAGTTTCGCTT 1369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073717780528512