Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq335 122 7e-23
seq1054 116 3e-21
>seq335
Length=36749
Score = 122 bits (134), Expect = 7e-23
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 45121 TCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATC 45180
||| || |||||||| || ||| ||||||||| ||||||||||| || ||| |
Sbjct 30417 TCTCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCC 30358
Query 45181 GTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTT 45240
|| || || || || |||||||| |||| ||||| ||||| || || | ||||||||
Sbjct 30357 ATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTT 30298
Query 45241 GTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAAT 45300
|||| || || ||| || | | |||| ||||||||| | ||| ||
Sbjct 30297 GTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGAT 30238
Query 45301 CGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||||||||||||| |||||||| ||||||||||||
Sbjct 30237 AGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATG 30201
>seq1054
Length=16682
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || |||||||||||||||||||||| ||| |||| | || |||
Sbjct 1736 ACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCATCCTCC 1795
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || ||||| ||||| |||| ||||| ||||| ||||| | |||||||| ||| |
Sbjct 1796 AACTGCTTTCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGA 1855
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| ||| ||||||| || || ||||||
Sbjct 1856 ATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTTG 1915
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| ||||| || || || |||||
Sbjct 1916 CCAGTCAGGGTCTTGACGAAAATCTGCAT 1944
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || |||||||||||||| |||||||||||| |||| | | || ||
Sbjct 1052 ACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCG 1111
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || |||| ||||| ||||| || || | ||||||||| |||
Sbjct 1112 AGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGG 1171
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||| | ||||| |||||
Sbjct 1172 ATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTTT 1231
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||| ||||| ||||| || |||||
Sbjct 1232 CCAGTCAAGGTCTTGACAAAAATCTGCAT 1260
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||| ||||| ||| |||||||||||||||||| ||| || ||| | || |||
Sbjct 1508 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCCTCC 1567
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || |||| ||||| ||||| ||||| | ||||||||| || |
Sbjct 1568 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTATCTTGA 1627
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | || |||||||| | || ||||||||
Sbjct 1628 ATCTTCGACTTTACGTTGTCAATGGTATCGGATGATTCCACCTCAAGCGTGATCGTCTTC 1687
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| || ||||| || || || |||||
Sbjct 1688 CCCGTAAGGGTCTTGACGAAAATCTGCAT 1716
Score = 87.8 bits (96), Expect = 1e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| |||||||||||| || ||| |||| ||
Sbjct 1964 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 2023
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
||||| ||||||||||| |||| || || ||||| || || | |||||||||||
Sbjct 2024 AGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATTCCCTCCTTGTC 2079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395058183864214
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |