Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1566 304 1e-77 seq2445 199 4e-46 seq1054 120 3e-22 seq2493 116 3e-21 seq335 102 7e-17 >seq1566 Length=8448 Score = 304 bits (336), Expect = 1e-77 Identities = 632/935 (68%), Gaps = 11/935 (1%) Strand=Plus/Minus Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 |||| || || ||||| ||||| ||| | | |||||| ||||| || || || || | Sbjct 8316 CAAG-TTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCCGTGCACAGGT 8258 Query 23091 T---GCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCT 23147 | ||| | || || || | || |||||||||| || || ||||| | ||||| Sbjct 8257 TAGAGCTGCGG---ATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCT 8201 Query 23148 TGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAG 23207 |||| | |||| | || | || ||||| ||| ||||||| || | ||| | Sbjct 8200 TGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCT 8141 Query 23208 TCTGAGCGTGAACACGTCGCACGTACCTGCCTTCTTC--CTCGTACTTTTGGTACAACGC 23265 |||| || | | | ||| || ||| | |||| | |||||| || | ||| | || Sbjct 8140 TCTGGGCCTTGATA-GTCTTGCGACCCTTC-TTCTCCGACTCGTATTTCTCGTAGAGAGC 8083 Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 || || || |||||||| ||| |||| || || ||| | || ||||||||| | Sbjct 8082 CTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGAGAGT 8023 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 ||| || || ||||| || |||| || |||||||| ||||| ||||||||||| Sbjct 8022 CCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAA 7963 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || ||||| || || ||||| |||||| |||||| |||| ||||| || || || Sbjct 7962 CAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAACTCGAA 7903 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 || || || ||||| ||||| | ||| | ||| || || || || | ||| ||||| || Sbjct 7902 GACATCAGCGTGCCATGGCTCAACGTAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACC 7843 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| || ||||| | ||| ||||||||| | || | ||||| || |||| |||||| || Sbjct 7842 CTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGA 7783 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 ||| || || | | ||| | || || | || | || || || Sbjct 7782 GTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTTCAATCC 7723 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || |||||| | | || || ||||| || ||| || || ||||| ||||| ||||| Sbjct 7722 GATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTC 7663 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 || || ||||| || | |||||||||| || || |||| || || | || ||| | Sbjct 7662 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGAGCCTGTGGTGTACC 7603 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 || ||| ||||| ||| |||||| || |||||| ||||| || ||||| || Sbjct 7602 AGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGT 7543 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 || ||||| ||||| ||||| ||||| || || | || || ||||| ||||||| Sbjct 7542 CTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCATAATCATGTG 7483 Query 23866 TTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTT 23925 || || || || | | ||| | || || || |||||||| | | || || Sbjct 7482 CTGTGGCCTTTCAGCAACGTTGCCATCAAGGCGGAGAAGGTATGAACGCTCAAGGGTCTT 7423 Query 23926 AAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960 || |||||||| | ||||| || ||||| |||| Sbjct 7422 GAAGCCAAAATATTGGTAGTTGAAATCACGGTCGT 7388 >seq2445 Length=7783 Score = 199 bits (220), Expect = 4e-46 Identities = 496/744 (67%), Gaps = 23/744 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| ||||| || || ||||| | || || | ||||| Sbjct 8 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACCTC 67 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | || |||| || |||| | | || || Sbjct 68 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAATGACGATGAGCGCTACTTCATCTCC 127 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||| || || || ||||| |||||||| | |||| | Sbjct 128 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTTCTCGAGCGC 187 Query 57747 TTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 || || || | || ||| | | ||||| | ||||| ||||| || ||| | | Sbjct 188 TT--CAGCAGTGAGGTCCAAATCCCAGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGA 245 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || ||| | || | || | || || || |||||||| || ||| | ||||| | | Sbjct 246 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGG 305 Query 57865 ACGAGAA-ACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 | || || || || ||||| || ||||| || || || ||| |||||||| Sbjct 306 CCCAGCGCACATAC-CTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCC 364 Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980 || ||| | ||| ||||| || | || || |||| || ||| || | || | Sbjct 365 GACTGGGCTGTCAGGTGGATCCAA---GACAAGGATTCCACCTTTGCCCAGCGCCTGGTT 421 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||| ||||| || ||||| ||||| || ||| || || | || || ||| | Sbjct 422 GCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTC 481 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || || || ||| | |||||||| || ||||||| | || || ||||| ||| Sbjct 482 AAGAAGCGTGGTCTCATGGCTGGCCTGACTTTCTCCAACGAGCTCATCTCCCGCGATGAG 541 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG---ACG 58157 |||||||| ||||| || || ||||| | | ||| ||| || | | |||| | | Sbjct 542 GGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCACCTT----AGACACCGCCCAAG 597 Query 58158 CGGGATCGC-ATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | | || || ||| | ||||||||||| ||||||||||| | ||||| | || Sbjct 598 CAAGCAGGCTGTCCAGGATGTCATCACCGAGGCTGTCGCGATCGAGCAAGAGTTCTTGAC 657 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 || || || || || ||||||| |||||| | |||||| | ||||| || Sbjct 658 AGAGGCACTCCCATGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATCGA 717 Query 58277 GTTTGTTGCCGACAGACTTTTGCT 58300 || || |||||||| || |||| Sbjct 718 ATTCGTCGCCGACAGGCTGCTGCT 741 >seq1054 Length=16682 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| ||||| ||||| || ||||| | || || || ||||| Sbjct 1944 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTCGAGTCGTCC 1885 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||| ||||| ||| | || || |||||| Sbjct 1884 GACACCATCGACAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCGGACCAG 1825 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| || || |||||||| || | ||| || ||| || ||| Sbjct 1824 CAGCGCCTGATTTTCGCAGGAAAGCAGTTGGAGGATGGTCGCACTCTGTCCGACTACAAC 1765 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || |||||||| || |||| ||| | || | || |||| Sbjct 1764 ATTCAGAAGGAGTCGACTCTCCACTTGGTGCTTCGTCTTCGTGGTGGTA 1716 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || || || |||||||| | || || ||| | ||| Sbjct 1716 ATGCAGATTTTCGTCAAGACCCTTACGGGGAAGACGATCACGCTTGAGGTGGAATCATCC 1657 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || || || || ||||| || | || || |||||| Sbjct 1656 GATACCATTGACAACGTAAAGTCGAAGATTCAAGATAAGGAGGGTATTCCTCCGGACCAG 1597 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || ||||| || ||| |||| || || || |||||| ||| Sbjct 1596 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATTACAAC 1537 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || || || ||| |||| || | ||| | || |||| Sbjct 1536 ATTCAGAAGGAGTCCACCCTGCATTTGGTGCTGCGTCTGCGTGGTGGTA 1488 >seq2493 Length=2855 Score = 116 bits (128), Expect = 3e-21 Identities = 413/640 (65%), Gaps = 9/640 (1%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 |||| || ||||| |||||||| ||||| || || | |||||| | ||| || || | Sbjct 805 TGGTACGGAGATAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGG 746 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 | || | || || | || | ||||| | |||| ||||| |||||||| Sbjct 745 AGGTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGA 686 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322 | || || || ||||| |||||||| | | | || ||| || || ||||| || | Sbjct 685 TGAAGGCACCACGATCAGCGGCCATCTGGACGATGGTGCGCTGAGAGATCTCCCAGACAG 626 Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTA 22381 ||||||| || | |||| || || || | | || | | |||| ||| || Sbjct 625 TCTTGTAGAGAGCCTTGATGTCGGCTGGGAT-GTTGGGAATGTTTTGGATGGATCCTCCG 567 Query 22382 TTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTG 22441 | ||||| || || || | || ||||| || ||| || ||| || ||| Sbjct 566 TCCGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCCTTG 507 Query 22442 ACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTG 22501 | || | | || || || || |||||||| | || ||| ||||| ||| ||||| Sbjct 506 AGCAACCAAGGATTGACAACCTGGAACTCGCCAGCCAGGACACGGCGCGAGTAGATGTTC 447 Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561 || ||| | || ||||| | || ||| || || ||||| | ||| ||||| || ||| Sbjct 446 GAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGC 387 Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCA 22619 || || || | || || ||||| | | ||||||| |||| | || ||| Sbjct 386 ATGGGTGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGACCTTGAGAGAG 327 Query 22620 TCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGC 22679 || |||||||||||| |||| || || || | |||||||||||||||| | | ||| Sbjct 326 TC--CCAGTCCCACAGGTCGGTAGGGGTGAC---GCCCCACATATCGTATTGGAGCTCGC 272 Query 22680 CGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGC 22739 | | | || || ||||| || ||||| | || | ||| ||| || || Sbjct 271 CCTTGGACACTGGAGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCAA 212 Query 22740 AGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGAT 22779 | ||| ||| ||||||| || || ||||| ||||| Sbjct 211 CGGACGCAGTCAAAGCGCCGTGGTAAATGGTCTCAAAGAT 172 >seq335 Length=36749 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| ||||| ||||| || |||||| | || || || |||| Sbjct 30201 CATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTC 30260 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 30261 CGACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 30320 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||| || || ||||| ||||| ||| | || || Sbjct 30321 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGA 30356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445746708269280