Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1566 113 9e-20
seq2445 95.1 2e-14
>seq1566
Length=8448
Score = 113 bits (124), Expect = 9e-20
Identities = 176/249 (71%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| ||||| |||||||| ||||| || || ||| || || ||||| ||||||
Sbjct 7724 CCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCC 7665
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGT 94904
||||| ||||| || | | | | | | |||||| || || || || | |||| |||
Sbjct 7664 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGAGCCTGTG-GTGT 7606
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || ||||| ||||| || || || || || | |||||||| | ||
Sbjct 7605 ACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 7546
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||| |||||| | | || || ||||||||||| || |||||||||||||||||
Sbjct 7545 TGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCATAATCAT 7486
Query 95025 GTCCTGAGG 95033
|| ||| ||
Sbjct 7485 GTGCTGTGG 7477
>seq2445
Length=7783
Score = 95.1 bits (104), Expect = 2e-14
Identities = 331/510 (65%), Gaps = 10/510 (2%)
Strand=Plus/Plus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCA---ATAACGATTTGGC 101907
|||||||||||||| | |||||| | | ||||| ||| || || | || ||
Sbjct 349 CATCAAGAAGAAGGCCGACTGGGCTGTCAGGTGGATCCAAGACAAGGATTCCACCTTTGC 408
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
| | | |||||||| ||||| ||||| || |||||||| || | ||||| ||
Sbjct 409 CCAGCGCCTGGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTC 468
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
||||||||| ||||||| | ||| | || |||| || || | |||||| ||| ||||
Sbjct 469 TATTTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGCCTGACTTTCTCCAACGAGCTCAT 528
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087
|| | || || ||||| || ||||| || ||| | || || | || |
Sbjct 529 CTCCCGCGATGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCA--CCTTAGA 586
Query 102088 TGATACCCCATCAAG-AGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAAC 102146
||| | |||| || | | | || | |||| || || ||| || || |
Sbjct 587 CACCGCCCAAGCAAGCAGGCTG--TCCAGGATGTCATCACCGAGGCTGTCGCGATCGAGC 644
Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206
|||| || | |||| | || || | | | || |||||| ||| |||||||
Sbjct 645 AAGAGTTCTTGACAGAGGCACTCCCATGTGCGCTGCTCGGCATGAACGCCAACTTGATGA 704
Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACT 102266
|| ||||| ||||| || || || | || || || | || || ||| ||
Sbjct 705 AGCAATACATCGAATTCGTCGCCGACAGGCTGCTGCTTTCCCTCGGTAACGAGAAGTTCT 764
Query 102267 ATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCG-AGAATAAGACCAAC 102325
| || |||||||||||| |||||||| || || ||||| | || | |||||||||
Sbjct 765 ACAAGTCTACCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGCAGGA-AAGACCAAC 823
Query 102326 TTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355
|| || || ||| | |||||||| || |||
Sbjct 824 TTCTTCGAGAAGCGTGTCGCCGACTACCAA 853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989539192254970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |