Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1566 187 3e-42
seq2445 125 9e-24
>seq1566
Length=8448
Score = 187 bits (206), Expect = 3e-42
Identities = 569/869 (65%), Gaps = 14/869 (2%)
Strand=Plus/Minus
Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002
|||| ||||||| ||||||||||| ||||||| | | | | || | | |||||
Sbjct 8327 GCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCC 8268
Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062
||||| || ||| | ||| || || | || | || || ||||| ||| ||
Sbjct 8267 GTGCACAGGTTAGAGCTGCGGATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA 8208
Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122
|||||||| || | ||||| || | || || ||| ||||||| || | ||| | | |
Sbjct 8207 GCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTAC 8148
Query 63123 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCT-TTCTCTT--TCGTATAGA-- 63176
|| | | || | ||||| || || ||| | | | ||||| ||||||
Sbjct 8147 CAAA-GCTTCTGGGCCTTGAT---AGTCTTGCGACCCTTCTTCTCCGACTCGTATTTCTC 8092
Query 63177 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGA 63236
||| | | | |||||||| || || |||| | |||||| ||| ||||| | ||
Sbjct 8091 GTAGAGAGCC--TCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGGG 8034
Query 63237 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63296
||||| | | ||| || |||| | || || || ||||| |||||||| || |||||
Sbjct 8033 CACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAG 7974
Query 63297 AGAGC-TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63355
||||| || || || || | | | |||||| || || ||||| | | ||
Sbjct 7973 AGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTC 7915
Query 63356 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63415
| |||| | | | ||||| ||||| || || | ||| ||||| | | ||||| ||
Sbjct 7914 CAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGGCGAAGGCACCAGGGCG 7855
Query 63416 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63475
||||| || ||||| || | |||||| || ||||| || | || | | ||| ||||
Sbjct 7854 CTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAAC 7795
Query 63476 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACT 63535
|||||||| || | || |||||||||| || || | || ||||||| ||| |
Sbjct 7794 GATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATG 7735
Query 63536 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63595
|| | || || || || || | || ||||| | || ||| || | |||||
Sbjct 7734 GATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTC 7675
Query 63596 ATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63655
|||||| || || || ||||| || |||||| | | || ||| |||| ||
Sbjct 7674 ATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGAGC 7615
Query 63656 ACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63715
| | || || ||||| || | || || || ||||| || || |||| ||| |
Sbjct 7614 CTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACAT 7555
Query 63716 TAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACG 63775
|| ||||| |||||||| || || |||||| ||||| || || || |||||
Sbjct 7554 GAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACG 7495
Query 63776 CATTAACATGTGCTGAGGTCTTTCAACAA 63804
||| | ||||||||| || |||||| |||
Sbjct 7494 CATAATCATGTGCTGTGGCCTTTCAGCAA 7466
>seq2445
Length=7783
Score = 125 bits (138), Expect = 9e-24
Identities = 363/555 (65%), Gaps = 9/555 (2%)
Strand=Plus/Minus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
||| || || | |||||||| || | ||||| || ||||| || || || |||||| |
Sbjct 868 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCTGC 809
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTA-AAttttt--ttAAA 33394
|| || || || |||||||| ||||| || |||||| ||||| || || | |||
Sbjct 808 CAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTAGACTTGTAGAACTTCTCGTTA-- 751
Query 33395 TCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACA 33454
|| | | | || || || ||||||||||| || ||| ||||||| |
Sbjct 750 -CCGAGGGAAAGCAGCAGCCTGTCGGCGACGAATTCGATGTATTGCTTCATCAAGTTGGC 692
Query 33455 ATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATAC 33514
||||| || | || | ||| || ||| | || | || ||||| || || | ||
Sbjct 691 GTTCATGCCGAGCAGCGCACATGGGAGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGAC 632
Query 33515 CGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAA 33574
|| | || || | | || | | | || || | ||| | || ||
Sbjct 631 AGCCTCGGTGATGACATCCTGGACAGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAA 572
Query 33575 CATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAA 33634
| | || ||||| || ||| |||||||| || | || | ||||| || ||
Sbjct 571 GAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAA 512
Query 33635 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGA 33694
|| || || | ||| || |||||||| || ||||| || || || ||||| || |||||
Sbjct 511 AGTCAGGCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGA 452
Query 33695 AAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCT 33751
|||||||| || || || ||||| ||||||| || | || || | || | |
Sbjct 451 GAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCTT 392
Query 33752 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33811
||| || |||||| | |||||| ||||||||||| || | ||||| || || || ||
Sbjct 391 GTCTTGGATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGAT 332
Query 33812 GGCATTAAAGAGATA 33826
|||||| ||||| ||
Sbjct 331 GGCATTGAAGAGGTA 317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629789777807520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |