Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1566 96.9 3e-15 >seq1566 Length=8448 Score = 96.9 bits (106), Expect = 3e-15 Identities = 374/585 (64%), Gaps = 2/585 (0%) Strand=Plus/Minus Query 37966 AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCC 38025 ||||| || |||||| || ||||| |||| ||| || | | || || || || | | Sbjct 8054 AATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTC 7995 Query 38026 ATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTT 38084 || || | ||| || | ||| | || ||| || || || || | ||| || || Sbjct 7994 ATGAAGAGATCCGGGATCCAGAGAGC-GTAGAACAAGTCACGGGCACGGACTTCCTCCTT 7936 Query 38085 CCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144 || ||||| || ||| | || ||||| | ||||||||||||||| || | || Sbjct 7935 GCCGTGGTTCTTCCTCAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTA 7876 Query 38145 AATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATT 38204 || | | || || || | || | || ||||| | || ||||| | ||||| || Sbjct 7875 GATGGCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTT 7816 Query 38205 ATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGT 38264 | | | | ||| || || ||||| || || || ||||| |||||| || || | Sbjct 7815 GAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGC 7756 Query 38265 ACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAA 38324 ||| | || || ||| | || |||||| || || || ||| ||||| || | Sbjct 7755 ACCGGTGGCACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCAT 7696 Query 38325 AGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTAT 38384 || ||| || | || ||| | ||||| || ||||| || ||||| || | | Sbjct 7695 GGCACATGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAA 7636 Query 38385 AAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATG 38444 || || |||| |||| | ||| || || || || || | ||| || || || || Sbjct 7635 GAAGCAGGATGACAGCTGAGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTG 7576 Query 38445 TATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCC 38504 | |||| |||| |||| || ||||| || || | | || ||||| |||| Sbjct 7575 TGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCC 7516 Query 38505 GTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 |||||| || | | || | ||| | ||| || ||||| ||||| Sbjct 7515 GTGAATGCCAACCGCCACACGCATAATCATGTGCTGTGGCCTTTC 7471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468504102916960