Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq1566 96.9 3e-15
>seq1566
Length=8448
Score = 96.9 bits (106), Expect = 3e-15
Identities = 374/585 (64%), Gaps = 2/585 (0%)
Strand=Plus/Minus
Query 37966 AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCC 38025
||||| || |||||| || ||||| |||| ||| || | | || || || || | |
Sbjct 8054 AATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTC 7995
Query 38026 ATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTT 38084
|| || | ||| || | ||| | || ||| || || || || | ||| || ||
Sbjct 7994 ATGAAGAGATCCGGGATCCAGAGAGC-GTAGAACAAGTCACGGGCACGGACTTCCTCCTT 7936
Query 38085 CCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144
|| ||||| || ||| | || ||||| | ||||||||||||||| || | ||
Sbjct 7935 GCCGTGGTTCTTCCTCAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTA 7876
Query 38145 AATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATT 38204
|| | | || || || | || | || ||||| | || ||||| | ||||| ||
Sbjct 7875 GATGGCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTT 7816
Query 38205 ATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGT 38264
| | | | ||| || || ||||| || || || ||||| |||||| || || |
Sbjct 7815 GAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGC 7756
Query 38265 ACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAA 38324
||| | || || ||| | || |||||| || || || ||| ||||| || |
Sbjct 7755 ACCGGTGGCACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCAT 7696
Query 38325 AGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTAT 38384
|| ||| || | || ||| | ||||| || ||||| || ||||| || | |
Sbjct 7695 GGCACATGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAA 7636
Query 38385 AAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATG 38444
|| || |||| |||| | ||| || || || || || | ||| || || || ||
Sbjct 7635 GAAGCAGGATGACAGCTGAGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTG 7576
Query 38445 TATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCC 38504
| |||| |||| |||| || ||||| || || | | || ||||| ||||
Sbjct 7575 TGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCC 7516
Query 38505 GTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549
|||||| || | | || | ||| | ||| || ||||| |||||
Sbjct 7515 GTGAATGCCAACCGCCACACGCATAATCATGTGCTGTGGCCTTTC 7471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468504102916960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |