Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq335 91.5 1e-13
seq1054 82.4 8e-11
>seq335
Length=36749
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611
||| || ||||||| || ||||| || || ||||| || || | |||| ||
Sbjct 30414 CAAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATC 30355
Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671
|||||||| || || || ||||||| || ||||| || || || || || || |||||
Sbjct 30354 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 30295
Query 139672 GGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731
||| || || | | || | ||||||| | ||||||||||| ||| | ||
Sbjct 30294 CTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGT 30235
Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||| |||| || || ||||| ||||||||
Sbjct 30234 CTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 30202
>seq1054
Length=16682
Score = 82.4 bits (90), Expect = 8e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||||| || ||||||| || ||||| || || ||||| || |||
Sbjct 1946 CCACCACGCAGACGCAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 2005
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||| || || || || || || |||||||||||||||| || || ||
Sbjct 2006 AGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGG 2065
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| ||| || || | | || | || |||| || ||| |||
Sbjct 2066 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACATTGTCGATGGTATCGGAGGACTCGACC 2125
Query 139718 TCAACGGTCACCGTCTTGCCGGTCA 139742
|||| ||| | |||||||| ||||
Sbjct 2126 TCAAGGGTGATGGTCTTGCCAGTCA 2150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496042086372800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |