Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq2445 129 8e-25
>seq2445
Length=7783
Score = 129 bits (142), Expect = 8e-25
Identities = 368/557 (66%), Gaps = 13/557 (2%)
Strand=Plus/Minus
Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820
||| || || | |||||||| || | ||||| || ||||| || || ||||||||| |
Sbjct 868 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCTGC 809
Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTA-ACAT-TATAAAtttttttAAAT 41878
|| || || || |||||||| ||||| || |||||| || | || || || | | |
Sbjct 808 CAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTAGACTTGTAGAACTTCTCGTTA-- 751
Query 41879 CCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAA 41938
|| | | | || || || |||| |||||| || ||| ||||||| |
Sbjct 750 CCGAGGGAAAGCAGCAGCCTGTCGGCGACGAATTCGATGTATTGCTTCATCAAGTTGGCG 691
Query 41939 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 41998
||||| || | || | ||| || ||| | || | || ||||| || || | |||
Sbjct 690 TTCATGCCGAGCAGCGCACATGGGAGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGACA 631
Query 41999 GCGTCTGTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTA 42055
|| || || || | | || | || | | ||| | || || | | | ||
Sbjct 630 GCCTCGGTGATGACA--TCCTGGACAGCCTGCTTGCTTGGGCGGTGTCTA-AGGTGGGAG 574
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|| | | || ||||| || ||| ||||||||||| | || | ||||||||
Sbjct 573 AAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAG 514
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|| || || || | ||| || |||||||| || ||||| || ||||| || || || ||
Sbjct 513 AAAGTCAGGCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCG 454
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CA 42232
|| |||||||| || || || || || ||||||| || | || || | || |
Sbjct 453 GAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCC 394
Query 42233 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 42292
|||| || |||||| | |||||| ||||||||||| || | ||||| || || ||
Sbjct 393 TTGTCTTGGATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCG 334
Query 42293 ATGGCATTAAAGAGATA 42309
|||||||| ||||| ||
Sbjct 333 ATGGCATTGAAGAGGTA 317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671109552425840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |