Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2445 178 2e-39
seq1566 113 7e-20
>seq2445
Length=7783
Score = 178 bits (196), Expect = 2e-39
Identities = 377/559 (67%), Gaps = 8/559 (1%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| | || || || ||||| | || ||| | || ||
Sbjct 8 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACCTC 67
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||||| |||| ||| | | ||| | | ||| |||||| | || || ||
Sbjct 68 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAATGACGATGAGCGCTACTTCATCTCC 127
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| || | || ||||| |||| || || ||||| |||||||| || || | ||
Sbjct 128 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTTCTCGAGCGC 187
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257
||| ||| | || ||||||| ||| ||||| ||||| ||||||||||||||
Sbjct 188 TTCAGCAGTGAGGTCCAAATCCCAGAGGC-TCGCTGCTTCTACGGTTTCCAAATCATGAT 246
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG-- 125315
|||||| | ||| | || | ||||| || || |||| ||||| || | |
Sbjct 247 CGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGC 306
Query 125316 -CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374
|| || | | || ||||| || || ||||| || | || | || || |||||
Sbjct 307 CCAGCGCACATAC---CTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGC 363
Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434
| |||| | |||||||| | ||| | | || | | ||| | | ||||| ||
Sbjct 364 CGACTGGGCTGTCAGGTGGATCCAAGACAAGGATTCCACCTTTGCCCAGCGCCTGGTTGC 423
Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494
||||| ||||| ||||| |||||||| || || || || | || || ||||||||
Sbjct 424 CTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAA 483
Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554
|||||| || |||||| | || ||||| | |||||| | || || || || |||||
Sbjct 484 GAAGCGTGGTCTCATGGCTGGCCTGACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGG 543
Query 125555 CCTACACTGTGACTTTGCC 125573
|| ||| |||||| |||
Sbjct 544 TCTCCACACTGACTTCGCC 562
>seq1566
Length=8448
Score = 113 bits (124), Expect = 7e-20
Identities = 314/475 (66%), Gaps = 10/475 (2%)
Strand=Plus/Plus
Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924
|||||||| ||||| ||||| || || || || || | ||| ||||| | || || |
Sbjct 7829 GATACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTACGTTGAGCCAT 7888
Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984
||||||| || || || || || | || || | || ||| ||| || || | |
Sbjct 7889 GGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGCAAGGAGGAAGTCC 7948
Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CA 97041
| ||| | |||||||| || || |||||| | || ||| | ||||||||||| || |
Sbjct 7949 GTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGA 8008
Query 97042 ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101
| |||||| |||||| || ||||||||| || | || || || | || |
Sbjct 8009 AGAACGGTG---ACTGGACTCTCATGTGCCCCAACGAATGCCCTGGATTGGCGGACGTTT 8065
Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAG-GGCCGATACGTGAGA 97160
|| || ||||| ||||| ||| | |||||| ||| | | || |||
Sbjct 8066 ACGGTGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAAGGGTCGCAAGA 8125
Query 97161 CGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAAC 97219
| | || | || | |||| || ||| | |||| | | ||||| ||||| ||||
Sbjct 8126 CTA-TCAAGGC-CCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAA 8183
Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCAC 97279
|| | ||| | ||||||||| | || ||||| |||||||| || | || ||
Sbjct 8184 CCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTAC 8243
Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334
|||| |||| || ||||||||||| ||||| |||||| | |||| || |||
Sbjct 8244 CATCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGATGAG 8298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741026463709840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |