Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq1054 100 2e-16
>seq1054
Length=16682
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
|||| ||||||||||| || ||||| || || || |||||||| ||||| || |
Sbjct 1502 CGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCA 1561
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||| ||||| ||| ||| || | || |||||||||| || || || || ||
Sbjct 1562 TCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTA 1621
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| |||| | ||||| | | ||| || ||| | || || || || || |||
Sbjct 1622 TCTTGAATCTTCGACTTTACGTTGTCAATGGTATCGGATGATTCCACCTCAAGCGTGATC 1681
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || |||||||| || || |||||||| |||||
Sbjct 1682 GTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318763870049532
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |