Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1054 116 9e-21 >seq1054 Length=16682 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || ||||| || ||||| | ||| || || | || ||||| Sbjct 1748 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCATCCTCCAACTGCTTTCCT 1807 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | ||| || || ||||| || || || |||||||||||||| | || Sbjct 1808 GCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGAATCTTCGACTTC 1867 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| ||| | || ||||| | || || ||||| ||||| || || Sbjct 1868 ACATTGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGGGTC 1927 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 1928 TTGACGAAAATCTGCAT 1944 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||||||||| || || ||||| || || || ||||| | ||| | ||||| Sbjct 1277 AGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCGTCC 1336 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || || ||||| || | ||| || || || || || || || ||||| Sbjct 1337 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 1396 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || || || || | |||||| | || || || || ||||| ||| Sbjct 1397 TGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTC 1456 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || || ||||| Sbjct 1457 TTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151346265400072