Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2083 116 6e-22
>seq2083
Length=15769
Score = 116 bits (128), Expect = 6e-22
Identities = 124/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| |||| |||| | |||| ||||||| || || |||| |||||
Sbjct 8844 TGATCTACGAGGAGACCCGTGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGATG 8903
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| ||||||||| | ||| ||||||| |
Sbjct 8904 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGATGTCGTCTACG 8963
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| |||| ||||||||||| | | || ||||| || |||||
Sbjct 8964 CCCTGAAGCGTCAAGGCCGCACCCTGTACGGTTTCGGTGGTTAA 9007
Score = 95.1 bits (104), Expect = 2e-15
Identities = 79/94 (84%), Gaps = 2/94 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 8687 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 8745
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525
||| ||||| || |||||||| || |||||||||
Sbjct 8746 CCGCCGTCTCGCACGTCGTGGAGGTGTCAAGCGT 8779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79071968839062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |