Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1566 192 7e-44
seq2445 127 3e-24
>seq1566
Length=8448
Score = 192 bits (212), Expect = 7e-44
Identities = 574/873 (66%), Gaps = 22/873 (3%)
Strand=Plus/Minus
Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947
|| ||||| ||||||| ||||| ||||| ||||||| | | | | || | | ||
Sbjct 8331 CAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAAT 8272
Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007
||| ||||| || ||| | ||| || || | || | || || ||||| |||
Sbjct 8271 CTCCGTGCACAGGTTAGAGCTGCGGATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTT 8212
Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067
|| |||||||| || | ||||| || | || || ||| ||||||| || | ||| |
Sbjct 8211 GCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGA 8152
Query 63068 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCT-TTCTCTT--TCGTATA 63123
| ||| | | || | ||||| || || ||| | | | ||||| ||||||
Sbjct 8151 GTACCAAA-GCTTCTGGGCCTTGAT---AGTCTTGCGACCCTTCTTCTCCGACTCGTATT 8096
Query 63124 GT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 63181
||| | | | |||||||| || || |||| | |||||||||| ||||| |
Sbjct 8095 TCTCGTAGAGAGCC--TCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTT 8038
Query 63182 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 63241
|| ||||| | | ||| || |||| | || || || ||||| |||||||| || ||
Sbjct 8037 GGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGAT 7978
Query 63242 CCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAA 63300
||| ||||| || || || || | || | |||||| || || ||||| | |
Sbjct 7977 CCAGAGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCA 7919
Query 63301 GATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAG 63360
|| | |||| | | | ||||| ||||| || || | ||| ||||| | | ||||
Sbjct 7918 AGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGGCGAAGGCACCAG 7859
Query 63361 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 63420
| || ||||| || ||||| || | |||||| || ||||| || | || | | ||| |
Sbjct 7858 GGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGG 7799
Query 63421 GAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT 63480
||| |||||||| || | || |||||||||| || || || ||||||| |||
Sbjct 7798 GAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATAC 7739
Query 63481 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63540
| || | || || || || || | || ||||| | || ||| || | |
Sbjct 7738 GATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTG 7679
Query 63541 TGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT 63600
|||||||||||||||| || ||||| || |||||| | | || ||| ||||
Sbjct 7678 TGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACA--- 7622
Query 63601 GGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 63656
| ||| | || || || ||||| || | || || || ||||| || || ||||
Sbjct 7621 GCTGA-GCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTG 7563
Query 63657 TCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACT 63716
||| | || ||||| |||||||| || || |||||| ||||| || ||
Sbjct 7562 GAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACC 7503
Query 63717 GCGACACGCATTAACATGTGCTGAGGTCTTTCA 63749
|| |||||||| | ||||||||| || ||||||
Sbjct 7502 GCCACACGCATAATCATGTGCTGTGGCCTTTCA 7470
>seq2445
Length=7783
Score = 127 bits (140), Expect = 3e-24
Identities = 363/554 (66%), Gaps = 7/554 (1%)
Strand=Plus/Minus
Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059
||| || || | |||||||| || | ||||| || ||||| || || || |||||| |
Sbjct 868 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCTGC 809
Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTA-ACAT-TATAAAtttttttAAAT 33117
|| || || || |||||||| ||||| || |||||| || | || || || | | |
Sbjct 808 CAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTAGACTTGTAGAACTTCTCGTTA-- 751
Query 33118 CCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAA 33177
|| | | | || || || ||||||||||| || ||| ||||||| |
Sbjct 750 CCGAGGGAAAGCAGCAGCCTGTCGGCGACGAATTCGATGTATTGCTTCATCAAGTTGGCG 691
Query 33178 TTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACC 33237
||||| || | || | ||| || ||| | || | || ||||| || || | ||
Sbjct 690 TTCATGCCGAGCAGCGCACATGGGAGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGACA 631
Query 33238 GCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAAC 33297
|| || || || | | || | | | || || | || | || ||
Sbjct 630 GCCTCGGTGATGACATCCTGGACAGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAG 571
Query 33298 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAAC 33357
| | || ||||| || ||| |||||||| || | || || |||||||| ||
Sbjct 570 AGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAA 511
Query 33358 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAA 33417
|| || || | ||| || |||||||| || ||||| || || || ||||| || || ||
Sbjct 510 GTCAGGCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAG 451
Query 33418 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTG 33474
|||||||| || || || ||||| ||||||| || | || || | || | ||
Sbjct 450 AAGAAGATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCTTG 391
Query 33475 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33534
|| || |||||| | |||||| ||||||||||| || | ||||| || || || |||
Sbjct 390 TCTTGGATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATG 331
Query 33535 GCATTAAAGAGATA 33548
||||| ||||| ||
Sbjct 330 GCATTGAAGAGGTA 317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622919681307440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |