Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1566 334 2e-86 seq2493 134 4e-26 >seq1566 Length=8448 Score = 334 bits (370), Expect = 2e-86 Identities = 599/863 (69%), Gaps = 14/863 (2%) Strand=Plus/Plus Query 363443 TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502 ||| |||| | || ||||| ||| | |||||||| || |||| || || || |||| Sbjct 7466 TTGCTGAAAGGCCACAGCACATGATTATGCGTGTGGCGGTTGGCATTCACGGCGAGGATA 7525 Query 363503 TTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TTCACGCACGCCACG 363561 |||| || ||||| ||||| || || | | | | || ||||| |||||| | Sbjct 7526 TTGAGAAGGCCATTGAGACATACAACCTCATGTCTTC-CAAATACTTCACACACGCCTCC 7584 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 |||||| | | ||||||||| || | | | ||| |||| || ||||| | | | Sbjct 7585 CCAACACTCTTCAATGCTGGTACACCACAGGCTCAGCTGTCATCCTGCTTCTTGGTCGAC 7644 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 |||||||| ||| || |||||||||| ||||||||| |||| ||||| | || || Sbjct 7645 ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCA 7704 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA--CAGAACAGTTACA 363739 |||| ||| || || || || | ||||| | | ||||| | | || |||| Sbjct 7705 AAGACTGCCGGAGGTATCGGATTGAACATCCATCGTATCCGTGCCACCGGTGCA--TACA 7762 Query 363740 TTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799 || ||| || ||| ||||||| || | ||||||||||| || || || |||| | Sbjct 7763 TTGCCGGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACA 7822 Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859 |||| || ||||| ||||||||||| |||||| || || || || || || | | Sbjct 7823 CTGCCAGATACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTACGTTG 7882 Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGG 363919 |||| || || ||| | || ||||| | || | |||| ||| || || |||| Sbjct 7883 AGCCATGGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGCAAGGAGG 7942 Query 363920 AATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCG 363979 || | ||||| ||||| ||||||| || || ||| | | || | || |||||||| | Sbjct 7943 AAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTG 8002 Query 363980 TGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 | ||| | | | | | ||| | ||| | ||||| ||||||| || || | | || Sbjct 8003 TTGAG--AAGAACGGTGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGATTGGCGGA 8060 Query 364038 TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCG 364097 || | ||||| || | | ||||| ||||| || || || |||||| |||| ||| Sbjct 8061 CGTTTACGGTGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAAGGGTCG 8120 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 ||||| || || |||||||| |||| |||| | || || |||| ||||||||| Sbjct 8121 CAAGACTATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGG 8180 Query 364158 AACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTG 364216 || ||||| | ||||||||||| ||| | |||||||||||| ||||||| || |||||| Sbjct 8181 AA-ACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTG 8239 Query 364217 GTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 |||| | || |||| | ||||| || || |||||| | || ||| | ||||| || ||| Sbjct 8240 GTACCA-TCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGATGAG 8298 Query 364276 ACTGCCGTATGTAACCTTGCGTC 364298 |||||| |||||| | || || Sbjct 8299 GTTGCCGTGTGTAACTTGGCATC 8321 >seq2493 Length=2855 Score = 134 bits (148), Expect = 4e-26 Identities = 404/620 (65%), Gaps = 8/620 (1%) Strand=Plus/Plus Query 364541 AGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCA 364600 |||||||||| || || || | ||| ||||||| || ||| |||| | | Sbjct 170 AGATCTTTGAGACCATTTACCACGGCGCTTTGACTGCGTCCGTTGAGCTGGCCCAGATTC 229 Query 364601 AGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATC 364660 | || | ||| || || ||||| || || | || |||| | |||| | ||| Sbjct 230 ACGGCACATACGAGACCTACGAGGGATCTCCAGTGTCCAAGGGCGAGCTCCAATACGATA 289 Query 364661 TATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAG 364719 | ||| ||||| || | | || ||| ||||||| | || | | |||| | ||| Sbjct 290 TGTGGGGCGTCACCCCTACCGACCTGTGGGACTGGGACTCTCTCAAGGTCCAGA-TCAAG 348 Query 364720 AAGCATGGTACTCGCAACTCC---CTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCA 364776 |||| ||| ||||||||| |||||| || ||||||||||| ||||| || | Sbjct 349 CAGCACGGTGTCCGCAACTCCCTTCTCGTT---GCACCCATGCCCACTGCTTCCACCTCC 405 Query 364777 CAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGG 364836 ||||| ||||| ||||||||||||||| || | || || | || || ||||| Sbjct 406 CAGATTCTCGGCTTCAACGAGTGCTTCGAGCCATACACCTCGAACATCTACTCGCGCCGT 465 Query 364837 GTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGC 364896 || || | || || || | ||| || ||| | | ||||||| | |||| Sbjct 466 GTCCTGGCTGGCGAGTTCCAGGTTGTCAATCCTTGGTTGCTCAAGGACTTGGTCGACATG 525 Query 364897 GGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAAC 364956 || |||||| ||||| |||||||||| |||||||| | || || | || ||| Sbjct 526 GGACTGTGGTCTGACAACATGAAGAACCGCATCATCGCGGACGGAGGATCCATCCAAAAC 585 Query 364957 ATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATG 365016 ||||| | |||| || | ||| || | ||||| || || ||||| || || | Sbjct 586 ATTCCCAACATCCCAGCCGACATCAAGGCTCTCTACAAGACTGTCTGGGAGATCTCTCAG 645 Query 365017 CGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTT 365076 || || || | | ||||| || ||||| ||||| || ||| |||| |||||| | Sbjct 646 CGCACCATCGTCCAGATGGCCGCTGATCGTGGTGCCTTCATCGATCAGTCCCAGTCCCTC 705 Query 365077 AACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGG 365136 ||| | ||||| | ||||| | |||| | || |||||||| || || ||| Sbjct 706 AACATCCACATGAAGGACCCAACAATGGGCAAGATCACCTCCATGCACTTTGCTGGCTGG 765 Query 365137 AAATCCGGTCTTAAGACAGG 365156 || ||| || ||||| || Sbjct 766 AAGCTCGGCCTCAAGACCGG 785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303294584963588