Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1054 134 1e-26 seq335 114 1e-20 seq1566 100 3e-16 >seq1054 Length=16682 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| ||||| | ||| |||||||| ||||||||||||||| | Sbjct 1490 CCACCACGCAGACGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGAC 1549 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || || |||| | ||||||||||||||||| Sbjct 1550 AAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 1609 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || ||| ||| | | || | ||||||| || || | Sbjct 1610 ATACCCTCCTTATCTTGAATCTTCGACTTTACGTTGTCAATGGTATCGGATGATTCCACC 1669 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || |||||||||||||| Sbjct 1670 TCAAGCGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || || || | |||||||||||| || |||||||| ||| Sbjct 1946 CCACCACGCAGACGCAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 2005 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| || ||||| || ||| |||| | ||| ||||||||||| ||| Sbjct 2006 AGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGG 2065 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | || | ||||||| |||||||| Sbjct 2066 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACATTGTCGATGGTATCGGAGGACTCGACC 2125 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || || || Sbjct 2126 TCAAGGGTGATGGTCTTGCCAGT 2148 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||||||||| ||||||||||| ||| | Sbjct 1718 CCACCACGAAGACGAAGCACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAC 1777 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | |||||| |||||| | || | ||||||||||||||||| Sbjct 1778 AGAGTGCGACCATCCTCCAACTGCTTTCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 1837 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || ||| ||| | | || | || |||| ||||||| Sbjct 1838 ATGCCCTCCTTATCCTGAATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACC 1897 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || |||||||||||||| Sbjct 1898 TCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 1944 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||||| || |||||||| || ||||||||||| | Sbjct 1262 CCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGAC 1321 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| ||| | || | |||||||||||||| ||| Sbjct 1322 AAAGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 1381 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||||| | || | ||||| | ||||||| Sbjct 1382 ATGCCCTCCTTATCTTGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACT 1441 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || ||||| ||||| || ||||| || ||||| Sbjct 1442 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1488 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| ||||| || || | || |||||| || |||||||| ||||| Sbjct 1033 GCCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 1092 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || | | ||||| |||||||| || || |||| | |||||||||||||| || Sbjct 1093 CAGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGG 1152 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || ||| ||| ||||| | || | || || | ||||| | Sbjct 1153 GATACCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAAC 1212 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || || || | || || || ||||||||||| Sbjct 1213 CTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 1260 >seq335 Length=36749 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 || || || | ||| |||||||| || |||||||| || | |||||| ||||| Sbjct 30410 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCG 30351 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 ||||||||||| ||| |||| | |||||||||||||| || ||||| || ||||| | Sbjct 30350 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 30291 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205 || || ||||| | || | ||| |||| ||||| | || | ||| | || || Sbjct 30290 ATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTG 30231 Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || || || || || ||||| || ||||||||| Sbjct 30230 CCCGTCAGGGTCTTCACGAAGATTTGCATGACT 30198 >seq1566 Length=8448 Score = 100 bits (110), Expect = 3e-16 Identities = 406/632 (64%), Gaps = 11/632 (2%) Strand=Plus/Minus Query 145850 TCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACAC 145909 ||||||||| |||||| |||| ||| | |||||| || | || || || || Sbjct 8102 TCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCAT 8043 Query 145910 TTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCT 145969 | |||||| ||||| || | ||| | ||||| | || |||| ||| || | ||| Sbjct 8042 TCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCC 7983 Query 145970 GGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGC 146029 || | ||| || ||||| | |||||| || || | ||||| || ||| | Sbjct 7982 GGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTC 7923 Query 146030 TTCAAATT-AAGCACACTATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGC 146088 |||| | ||| || | | ||| || |||||||| || |||| |||| ||||| ||| Sbjct 7922 CTCAAGTCCAAGAACTCGA-AGACATCAGCGTGCCATGGCTCAACGTAGATGGCGAAGGC 7864 Query 146089 TCCTTTTCGTTTG---CCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCAC 146145 || || ||| ||||||||||| |||| | | ||||||| |||||||| | Sbjct 7863 ACCAGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAG 7804 Query 146146 CATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCG 146205 |||||| ||| ||| | | ||||| ||| | || | ||| || || Sbjct 7803 CATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACG 7744 Query 146206 CACGCAATGAACATTCACGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCA-GTCGC 146264 | | ||| | |||| |||| ||| ||| | ||| || || ||| || ||| Sbjct 7743 GATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTC-T 7685 Query 146265 CGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTCGAATGCCGAGCAGAAAGCACGA 146322 ||| || || ||||| || ||||| ||||| |||| ||| ||| || ||||| || Sbjct 7684 TGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTC--ATGTCGACCAAGAAGCAGGA 7627 Query 146323 GCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACAT 146382 ||| ||| ||| || || || || ||| | || ||| ||||| || || Sbjct 7626 TGACAGCTGAGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTA 7567 Query 146383 TTTTCGGCTCATCATCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCC 146442 ||| ||| | || || || || || | | ||| || ||||| |||||||| Sbjct 7566 TTTGGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCC 7507 Query 146443 CAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474 | || || ||||| | |||||| || |||| Sbjct 7506 AACCGCCACACGCATAATCATGTGCTGTGGCC 7475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471991948834560