Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2445 129 7e-25 >seq2445 Length=7783 Score = 129 bits (142), Expect = 7e-25 Identities = 371/567 (65%), Gaps = 9/567 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || ||||| || || | ||| || || || || || | ||| ||| ||| || | Sbjct 565 GCAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTCAG 506 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || | | || || || ||||||||||| || || || || || || || || || Sbjct 505 GCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAA 446 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-C 93269 ||||| || ||||| || || || || | || | |||||| | ||||| || | Sbjct 445 GATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAA---GGTGGAATCCTTGTC 389 Query 93270 T--GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | |||||| | | |||||| ||||| || ||||| || ||||| | || ||||| || Sbjct 388 TTGGATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGC 329 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || ||||| |||| | || || |||||||| ||||| | || || || Sbjct 328 ATTGAAGAGGTATGTGCGCTGGGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTA 269 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | || | || | ||||| || |||||||| |||||||| || | ||| || | Sbjct 268 TGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGAGCCTCTGG 209 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 ||| || || || || | ||| | || || || ||||| || || || || || Sbjct 208 GATTTGGACCTCACTGCTGAAGCGCTCGAGAAGGTTCTCGTTGACAATTCCGTCAGACGC 149 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATC 93564 || || ||||| | | || || || | |||||| || || | | || | Sbjct 148 GGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGACGGTTGTT 89 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| ||| || || || || || || | || || ||||||| || || ||||| || Sbjct 88 CCAGTCGTGAAGGTCCTTGGAGAGGTCAATCTCCTCTGCAGTCCAGAAAGACGCTTCCGC 29 Query 93625 TTTTTTGTACATATCCCATATGTCTTG 93651 || |||||||| | ||| || | ||| Sbjct 28 CTTCTTGTACATCTGCCAGATCTATTG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556836200674160