Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1154 107 4e-18
seq1055 87.8 4e-12
>seq1154
Length=44727
Score = 107 bits (118), Expect = 4e-18
Identities = 126/168 (75%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||| || ||||| || ||||||| ||||| | ||||| || ||||
Sbjct 40396 CCAACTTCGGTCTCGATGCCGAGCTTGTTTCTCACTCCCGCATGCTGGGTCTCTCCGGAG 40337
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| | ||| ||| || |||| |||||| | |||||| ||||||||
Sbjct 40336 GTCAGCGTGTCAAGGTCGTCCTCGCCGCCTGCTC-GTGGCAGCGTCCTCACTTGATCGTT 40278
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
|| || |||||||||||||| |||||||| || |||||| ||||||
Sbjct 40277 CTTGATGAGCCTACCAACTACCTGGACCGTGACTCCCTGGGAGCTCTG 40230
>seq1055
Length=38570
Score = 87.8 bits (96), Expect = 4e-12
Identities = 136/189 (72%), Gaps = 4/189 (2%)
Strand=Plus/Minus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
||||||| || ||||| || |||||||| || ||||| ||||||||||||||| ||
Sbjct 20644 TCATTGGTGGTAACGGTGCCGGAAAGTCTACGCTCATCAAGCTCCTGACTGGCGAGA-CC 20586
Query 280234 AGGCCACTGAGGGGTCCGT-TTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCA 280291
| ||| | || |||| ||| |||||| |||||| |||| || | ||| | ||
Sbjct 20585 ATCCCAACCACTGG-CCGTGTTGAGAAGCACCCCAACTTGCGTATTGGATACATTAAGCA 20527
Query 280292 GCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTG 280351
|||||| | | ||| | |||| || || || | ||| || ||||| ||| | |||||
Sbjct 20526 GCACGCCCTTGAGCACGTTGAGATGCATCTTGAGAAGACCCCCAACCAGTACCTCCAGTG 20467
Query 280352 GCGCTATGC 280360
||| || ||
Sbjct 20466 GCGTTACGC 20458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027790260192094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |