Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1054 170 4e-37 seq2445 114 2e-20 seq1055 105 1e-17 seq1154 95.1 2e-14 seq872 87.8 3e-12 >seq1054 Length=16682 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || ||||| || || ||||| || ||||| Sbjct 1718 CCACCACGAAGACGAAGCACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAC 1777 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| || ||||| || || | || ||||| || ||| Sbjct 1778 AGAGTGCGACCATCCTCCAACTGCTTTCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 1837 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| || |||||||| | ||| || ||||||||||| | || || || Sbjct 1838 ATGCCCTCCTTATCCTGAATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACC 1897 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || || |||||||||||||| |||||||| Sbjct 1898 TCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 1944 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| ||||| || || |||||||| || || ||||| |||||||| Sbjct 1490 CCACCACGCAGACGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGAC 1549 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | |||||| || || || || || | || ||||| || ||| Sbjct 1550 AAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 1609 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| ||||||||||| | ||| ||| || ||||| || | |||||| || Sbjct 1610 ATACCCTCCTTATCTTGAATCTTCGACTTTACGTTGTCAATGGTATCGGATGATTCCACC 1669 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || ||||| |||||||||||||| |||||||| Sbjct 1670 TCAAGCGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || ||| ||| || |||||||| || ||| Sbjct 1034 CCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 1093 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||||||||| || | |||||||||||| || || || | || ||||| ||||| Sbjct 1094 AGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGGG 1153 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || || ||||| | ||||||| || |||||||| | || || || Sbjct 1154 ATACCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACC 1213 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| ||||| || | ||||||||| || |||||||| Sbjct 1214 TCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 1260 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | |||| |||||||| || |||||||| ||||| || Sbjct 1262 CCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGAC 1321 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || || || | |||||| || ||||| || || | || ||||| ||||| Sbjct 1322 AAAGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 1381 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| ||||||||||| | ||||||| |||||||| || | || || ||| Sbjct 1382 ATGCCCTCCTTATCTTGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACT 1441 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || ||||| ||||| ||||||||||| || ||||| Sbjct 1442 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1488 Score = 123 bits (136), Expect = 5e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| || || ||||| || |||||||| || |||||| Sbjct 1946 CCACCACGCAGACGCAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 2005 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || || | ||| ||||| || || Sbjct 2006 AGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGG 2065 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| ||| || |||||||| || | || || || Sbjct 2066 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACATTGTCGATGGTATCGGAGGACTCGACC 2125 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||||||||| || || || Sbjct 2126 TCAAGGGTGATGGTCTTGCCAGT 2148 >seq2445 Length=7783 Score = 114 bits (126), Expect = 2e-20 Identities = 557/877 (64%), Gaps = 47/877 (5%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || | ||| ||||| || | || || |||||||||||||| ||| || | Sbjct 868 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCTGC 809 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTC-TCGGC--GCCAAACTGCTTGGGGTA 10051 ||||| ||| ||||||||||||||||||||| | | | | |||| || | | Sbjct 808 CAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTAGACTTGTAGAACTTCTCG---TT 752 Query 10052 ACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGA 10111 |||||| | | | | ||| || ||||| |||||||| || |||||| || | Sbjct 751 ACCGAGGGAAAGCAGCAGCCTGTCGGCGACGAATTCGATGTATTGCTTCATCAAGTTGGC 692 Query 10112 GTTCATGCCAATCATGCGG-CAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGA 10170 ||||||||| | || ||| || |||| || || | ||| || | ||| | |||| Sbjct 691 GTTCATGCCGAGCA-GCGCACATGGGAGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGA 633 Query 10171 CCGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTT--CTCGAGCT---T 10225 | || |||| |||| || || || ||||| || | || | || | Sbjct 632 CAGC---CTCGGTGATG---------ACATCCTGG-ACAGCCTGCTTGCTTGGGCGGTGT 586 Query 10226 CGAAT--------ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATG 10277 | || | ||||| | || | |||||| ||||| |||||| |||| Sbjct 585 CTAAGGTGGGAGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATG 526 Query 10278 AACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCG 10337 | ||||||||| ||| ||| || | |||||| || || || ||||||||||| | | Sbjct 525 AGCTCGTTGGAGAAAGTCAGGCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAG 466 Query 10338 CAGAACGACCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCG 10397 |||||| |||||||| | | |||||| ||| | |||| || ||||||| || Sbjct 465 GCGAACGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCA 406 Query 10398 AAGGAGCGGTCGCGCGAAAAGTAT----TTCGAGGCCCACGCTGCCTTCTTTCCCACGGC 10453 |||| | || | | | || | ||||| | |||||||| | | Sbjct 405 AAGGTGGAATC-CTTGTCTTGGATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCA 347 Query 10454 AGGGATCGTCTCGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGC 10513 |||||| |||||||| || | |||||| | | |||| || || |||| || | Sbjct 346 AGGGATGGTCTCGATGGCATTGAAGAGGTATGTGCGCTGGGCCTGCTCCTTGATGTATGT 287 Query 10514 ATCAAGGAGCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTA 10573 || | ||| ||||||||| |||| ||| | | |||| | ||| || |||| Sbjct 286 GTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTA 227 Query 10574 GAACATACGTGCCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCAT 10633 ||| || ||| ||| ||| || | ||| | | |||||||| | Sbjct 226 GAAGCAGCGAGCCTCTGGGATTTGGACCTCACTGCTGAAGCGCTCGAGAAGGTTCTCGTT 167 Query 10634 CACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATC 10693 || || || || | || ||||| |||| | ||| |||||||| ||||||||| Sbjct 166 GACAATTCCGTCAGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATC 107 Query 10694 ATCGTT----CAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCA 10749 || || | ||| || |||||| | |||| | ||| | | |||||| Sbjct 106 GTCATTGAGACGGTTGTT----CCAGTCGTGAAGGTCCTTGGAGAGGTCAATCTCCTCTG 51 Query 10750 CGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 | |||||||||| || | ||||||||||||||||| Sbjct 50 CAGTCCAGAAAGACGCTTCCGCCTTCTTGTACATCTG 14 >seq1055 Length=38570 Score = 105 bits (116), Expect = 1e-17 Identities = 150/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 225432 CCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCG 225491 ||| ||| ||| | || |||||||| |||||||| || || |||| || | | | | Sbjct 20918 CCGTGCAGACTTCATCGAGGAAGCCGGAGTCGTGAGAAACGATGAGAGAAGTGATCTCGG 20977 Query 225492 TCAGGCCCTTGAGGTG--CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGT 225549 | || ||| |||| | || |||||| |||||| ||||||| |||||| || Sbjct 20978 TGTGGGTCTTCAGGTAATCCTG--GAGCCACTTAACGTTGGCAACGTCCAAGTGGTTAGT 21035 Query 225550 AGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTT 225609 ||||||||||| || || | ||||| | ||||| || || | | |||| ||||| Sbjct 21036 AGGTTCGTCCAAGAGGAGAACATCAGCCTTCATGAGCATAGCTCTGGCAAGAGCGAGCTT 21095 Query 225610 CATTTTCCAGCCCCCGGACAGGGAGCCGA 225638 ||| ||||| || |||||||||||||||| Sbjct 21096 CATCTTCCATCCACCGGACAGGGAGCCGA 21124 Score = 95.1 bits (104), Expect = 2e-14 Identities = 131/181 (72%), Gaps = 8/181 (4%) Strand=Plus/Plus Query 224974 GGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTG 225033 ||| || |||||||||| |||||||||||||||| | || || || |||||| || | Sbjct 20457 GGCGTAACGCCACTGGAGGTACTGGTTGGGGGTCTTCTCAAGATGCATCTCAACGTGCTC 20516 Query 225034 GAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCG 225093 | || ||||| | ||| | || |||| |||||| |||||| ||| ||| Sbjct 20517 AAGGGCGTGCTGCTTAATGTATCCAATACGCAAGTTGGGGTGCTTCTCAACACGGCC--- 20573 Query 225094 AGTCGGTTG----TGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCAT 225149 ||| ||||| | |||||| || |||| |||||||||||||| ||| || ||||| | Sbjct 20574 AGT-GGTTGGGATGGTCTCGCCAGTCAGGAGCTTGATGAGCGTAGACTTTCCGGCACCGT 20632 Query 225150 T 225150 | Sbjct 20633 T 20633 >seq1154 Length=44727 Score = 95.1 bits (104), Expect = 2e-14 Identities = 141/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 ||||| |||||||||| | || ||| | || ||||||| || |||||| |||||| Sbjct 40759 CGCCATTGGATGTACTCGGAAGGAGTCTTCTCGAGGTGGTGATCGATATGGGCGAAAGCG 40818 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| | ||| || || || ||||| || | | ||| | |||| |||| Sbjct 40819 TGCTGCTTAATGTAGGCGATACGGATGTTCTCGTGGGTGTAGACAT--CACCGA--CGGT 40874 Query 225101 TGTGC----CTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156 || | ||| || || ||||| |||||||| |||| ||| || ||||| |||||||| Sbjct 40875 TGGGATCAGCTCACCAGTAAGGACGTTGATGAGAGTAGACTTTCCGGCACCGTTGGGGCC 40934 Query 225157 AATCACGCCAATCCGGGA 225174 ||| ||| |||| ||||| Sbjct 40935 AATGACGGCAATACGGGA 40952 >seq872 Length=14839 Score = 87.8 bits (96), Expect = 3e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 195992 TGGGTCGTCTTTGACGAAATCCACTACATGTCCGACGATGCGCGTGGTACCGTGTGGGAA 196051 ||||||||||| ||||||||||| || ||| ||| | || |||||| ||||||||| Sbjct 4961 TGGGTCGTCTTCGACGAAATCCATTATATGAGAGACAAGGCTCGTGGTGTTGTGTGGGAA 4902 Query 196052 GAAAGCCTTATCCTCATCCCGGATACCATCCGCTGTGTCTTTTTGTCCGCGACTGTTCCC 196111 || | | | ||||| |||| || | |||||| ||||| ||||||| || ||||| Sbjct 4901 GAGACCATCATCCTTCTCCCAGACAAGGTCCGCTACGTCTTCCTGTCCGCCACCATTCCC 4842 Query 196112 AAC 196114 ||| Sbjct 4841 AAC 4839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921581687330480