Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq1054 122 7e-23
>seq1054
Length=16682
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | || || ||||| | || || || || |||||||||||||||
Sbjct 1487 ATACCACCACGCAGACGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCG 1546
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || || || |||||||| |||| || ||||| |||||||||
Sbjct 1547 GACAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGA 1606
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || || || |||||| |||| | |||| ||| |||| |||||
Sbjct 1607 GGAATACCCTCCTTATCTTGAATCTTCGACTTTACGTTGTCAATGGTATCGGATGATTCC 1666
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | ||| || || || || || || || |||||||||||
Sbjct 1667 ACCTCAAGCGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || || || | || || || || ||||||||||| |||
Sbjct 1715 ATACCACCACGAAGACGAAGCACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCG 1774
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| ||| ||| || | || || || ||| | || || ||||| |||||||||
Sbjct 1775 GACAGAGTGCGACCATCCTCCAACTGCTTTCCTGCGAAAATCAGGCGCTGCTGGTCCGGA 1834
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || || || |||||| || | | || | |||||||| || |||
Sbjct 1835 GGAATGCCCTCCTTATCCTGAATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCG 1894
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| ||||| || || || |||||||||||
Sbjct 1895 ACCTCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 1944
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| | ||||| || || || || || |||||||||||
Sbjct 1259 ATACCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCA 1318
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| |||||| || || || || || || ||| | || || ||||| ||||||||
Sbjct 1319 GACAAAGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 1378
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || || || |||||| || | | || | ||| || | || |||
Sbjct 1379 GGGATGCCCTCCTTATCTTGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCG 1438
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || ||||| ||||| || || || || |||||
Sbjct 1439 ACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420116304548808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |