Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq2445 93.3 9e-14
seq1055 89.7 1e-12
>seq2445
Length=7783
Score = 93.3 bits (102), Expect = 9e-14
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627
||||||||| | | | ||| || |||||||||||||| |||||| | | | |
Sbjct 683 GGCATGAACGCCAACTTGATGAAGCAATACATCGAATTCGTCGCCGACAGGCTGCTGCTT 742
Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687
| || ||| | ||||| | ||||| || | |||||||||| ||| |||||| |||
Sbjct 743 TCCCTCGGTAACGAGAAGTTCTACAAGTCTACCAACCCCTTTGACTTCATGGAGAACATC 802
Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGT 243747
|| || ||| || || ||||||||||| ||||||||| || || ||| |||||
Sbjct 803 TCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCCGACTACCAAAAGACTGGT 862
Query 243748 GTGATG 243753
|| |||
Sbjct 863 GTCATG 868
>seq1055
Length=38570
Score = 89.7 bits (98), Expect = 1e-12
Identities = 196/294 (67%), Gaps = 0/294 (0%)
Strand=Plus/Plus
Query 333698 GTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTT 333757
|||||||||| | ||||| || ||| |||||||||| || || ||||||||
Sbjct 20823 GTAGTAACTCTTGGCCTCGGGCTTCTGCTTGACGAACTCGGCCAAGTTACCCTTGTAGCA 20882
Query 333758 CTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCC 333817
|||||| ||| ||||| ||| ||| ||||| || | |||||||| ||
Sbjct 20883 GGCCAGCTTCTTTCCAGGCTCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGGAAGCC 20942
Query 333818 GGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAG 333877
||||||||| || || || | | | | || | || | ||||||| || ||
Sbjct 20943 GGAGTCGTGAGAAACGATGAGAGAAGTGATCTCGGTGTGGGTCTTCAGGTAATCCTGGAG 21002
Query 333878 CCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGC 333937
|||| | ||||| | || | ||||| || || ||||| | || || | | ||
Sbjct 21003 CCACTTAACGTTGGCAACGTCCAAGTGGTTAGTAGGTTCGTCCAAGAGGAGAACATCAGC 21062
Query 333938 GTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991
|||| |||||| || | ||||||||||| ||||| ||||| || || || ||
Sbjct 21063 CTTCATGAGCATAGCTCTGGCAAGAGCGAGCTTCATCTTCCATCCACCGGACAG 21116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102830062282900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |