Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1566 187 3e-42 seq2493 165 1e-35 seq2445 143 3e-29 >seq1566 Length=8448 Score = 187 bits (206), Expect = 3e-42 Identities = 613/942 (65%), Gaps = 23/942 (2%) Strand=Plus/Minus Query 114455 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 114514 || ||| | || ||||| | || |||| |||||||| | |||||| | ||| | Sbjct 8342 ACGTACGTTGGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAG 8283 Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574 ||||| | ||| ||||| |||| || || || ||||| || | |||||| || || Sbjct 8282 TACTCGACAATCTCCGTGCACAGGTTAGAGCTGCGGATGGTACCAAGGTTCTTCTGGTTG 8223 Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 114634 ||| ||| || ||||||||||| | |||| | || | || ||||| || || ||| Sbjct 8222 CTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGAC 8163 Query 114635 TTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC 114693 | |||||| | | ||| | | || | | || | | ||| ||| | | || ||| Sbjct 8162 TCGAGAATGGAGTACCAAAGCTTCTGGGCCTTG-ATAGTC---TTGCGACCCTTCTTCTC 8107 Query 114694 C---TCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 114750 | ||||| || |||||| || || ||||| ||||| | || | | || || Sbjct 8106 CGACTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGG 8047 Query 114751 TGCCTTATCTGGG-CAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGA 114809 || || |||| || | ||||| ||| | ||| || |||||||||||||||||||| Sbjct 8046 -GCATTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGA 7988 Query 114810 GGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 114869 | || |||||||||||||| |||| | || || || |||| || | || || | Sbjct 7987 GATCCGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGT 7928 Query 114870 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 114929 | | ||| ||||| || || | || ||| |||||||| || || | ||| | |||| Sbjct 7927 TCTTCCTCAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGGCGA 7868 Query 114930 TTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATA 114983 | || | | || ||| |||||| || || || || ||| || || | Sbjct 7867 AGGCACC---AGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGA 7811 Query 114984 CGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTAT 115043 |||| ||||| |||| |||||| | || | || || || || ||| | Sbjct 7810 CGCGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGG 7751 Query 115044 TGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGC 115103 |||| | || | |||||||| || || ||||| || || ||||||||| || | Sbjct 7750 TGGCACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCAC 7691 Query 115104 ACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGC 115163 | | |||| || | ||||| || || || || |||| | ||| | ||||| Sbjct 7690 ATGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGC 7631 Query 115164 AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 115223 || |||| || | | |||||||||||| |||||||| ||||| | ||||| ||| Sbjct 7630 AGGATGACAGCTGAGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGA 7571 Query 115224 ACATACCTTGG--GACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 115281 | || |||| ||||| | ||| ||||| | | | ||| || || ||||| Sbjct 7570 A-GTA-TTTGGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTG 7513 Query 115282 AATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAG 115341 ||| || | || || ||||||| ||||| || || |||| | | | ||||| || Sbjct 7512 AATGCCAACCGCCACACGCATAATCATGTGCTGTGGCCTTTCAGCAACGTTGCCATCAAG 7453 Query 115342 CCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 | | ||||| ||| | |||||||| |||||||| Sbjct 7452 GCGGAGAAGGTATGAACGCTCAAGGGTCTTGAAGCCAAAATA 7411 >seq2493 Length=2855 Score = 165 bits (182), Expect = 1e-35 Identities = 475/724 (66%), Gaps = 24/724 (3%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 ||||| |||||||| || |||||||| || |||||||| || | ||||| |||| Sbjct 800 CGGAGATAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAGGTG 741 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | |||||| | |||| || ||| | ||||| |||||||||||| Sbjct 740 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATGAAG 681 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGTT 113773 |||||||| || ||||| | | | | | | || ||| ||||| ||||| Sbjct 680 GCACCACGATCAGCGGCCATCTGGACGA--TGGTGCG-CTGAGAGATCTCCCAGACAGTC 624 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 ||||||| ||| || || ||||||| | || ||||||||||| || || || Sbjct 623 TTGTAGAGAGCCTTGATGTCGGCTGGGATGTTGGGAATGTTTTGGATGGATCCTCCGTCC 564 Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCT----C 113889 || ||| | | |||||| | | ||||| || || || | | |||| | Sbjct 563 GCGATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCCTTGAGC 504 Query 113890 CACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATT 113949 || | | | ||||||||| ||||| || || ||| || | | ||||| || Sbjct 503 AACCA-AGG---ATTGACAACCTGGAACTCGCCAGCCAGGACACGGCGCGAGTAGATGTT 448 Query 113950 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGG 114009 | ||||||||||| |||||||| ||| || | || |||| |||||| || ||||| Sbjct 447 CGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGG 388 Query 114010 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGC 114069 ||||||||| | ||||||| ||| |||| ||| | | | | || | ||||||| | Sbjct 387 CATGGGTGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGACCTTGAGAGA 328 Query 114070 GTCCCAGTCGTA---GTTG--AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATA 114124 ||||||||| | || | || || | || ||||||||| | ||||| Sbjct 327 GTCCCAGTCCCACAGGTCGGTAGGGGTGACGCC-----CCACATATCGTATTGGAGCTCG 273 Query 114125 CCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCG 114184 || | ||| |||| |||||||| | |||||||||| ||| | || || |||| || Sbjct 272 CCCTTGGACACTGGAGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCA 213 Query 114185 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTG 114244 | ||| | || |||| || || |||||||| || | | || | ||| Sbjct 212 ACGGACGCAGTCAAAGCGCCGTGGTAAATGGTCTCAAAGATCTGGGAGTTGAGGTGCTTA 153 Query 114245 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 114304 |||||| |||||| || | || ||| | ||| |||| || ||||| |||||| Sbjct 152 GCCTCGGGGGAATCGAAGGGCAGGCGGAGGGCCAAGAATGCATCAGCAAGACCCTGGACA 93 Query 114305 CCGA 114308 |||| Sbjct 92 CCGA 89 >seq2445 Length=7783 Score = 143 bits (158), Expect = 3e-29 Identities = 343/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 |||||||||||| || ||||||||||| || || ||||| ||| || | ||||||||| Sbjct 550 GTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTCAGGCCAGCCATGAGACC 491 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | ||||||||| | || || || ||||||||||| ||||| || Sbjct 490 ACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAGATACCCTCAACGGC 431 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCACTTCATCG 126236 ||||| |||| || |||| ||||||| | | | |||| | | |||| | | | Sbjct 430 AGCGAAGGCAACCAGGCGCTGGGCAAAGGTG-GAATCCTTGTCTTGGATCCACCTGACAG 372 Query 126237 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 126296 |||| | ||||| |||| ||| || |||| ||||| ||| || | ||||| | | Sbjct 371 CCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTGAAGAGGTATGTGC 312 Query 126297 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCA 126356 | | | || |||||||| | || ||||| || ||||| ||| |||| | Sbjct 311 GCTGGGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 252 Query 126357 TTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 126415 | || || ||| || || ||||||| |||| || || || || |||||| | Sbjct 251 TCTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGAGCCTCTGGGATTTGGACCTCA-CT 194 Query 126416 GCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 126474 || || | | | | ||||| |||||||| || ||| | || || || || || Sbjct 193 GCTGAAGCGCTCGAGAAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGAG 134 Query 126475 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATC 126531 | | ||||| | | |||| || || | || | |||||||||| ||| || Sbjct 133 AACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGACGGTTGTTCCAGTCGTGAAGGTC 74 Query 126532 CTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||| ||||| || | |||||| |||||||| Sbjct 73 CTTGGAGAGGTCAATCTCCTCTGCAGTCCA 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597327211904720