Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1566 224 1e-53 >seq1566 Length=8448 Score = 224 bits (248), Expect = 1e-53 Identities = 500/743 (67%), Gaps = 8/743 (1%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| |||| || || ||||| || || || || | | ||| |||| || || ||| || Sbjct 7579 GCCTCCCCAACACTCTTCAATGCTGGTACACCACAGGCTCAGCTGTCATCCTGCTTCTTG 7638 Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 | ||| | |||| || || || || | |||| |||||| ||||| | Sbjct 7639 GTCGAC-ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCAT 7697 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGT 94068 |||||||| || || || ||||| | | |||| |||| ||||||| ||| Sbjct 7698 GATCTCAAAGACTGCCGGAGGTATCGGATTGAACATCCAT--CGTATCCGTGCCACCGGT 7755 Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 | ||||| ||||||||| || | ||| ||||| |||| || |||||||| |||||| Sbjct 7756 GCATACATTGCCGGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTC 7815 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 |||||| | || | ||||| ||||||||||| | | | ||| | ||||| || Sbjct 7816 AACAACACTGCCAGATACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATC 7875 Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248 || | ||||| |||||||| || || | ||| | ||| || | |||||||||||| Sbjct 7876 TACGTTGAGCCATGGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGC 7935 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || | | ||| | ||| | ||||||||||||||| | || || || || ||| Sbjct 7936 AAGGAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATG 7995 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 || || || ||||| ||| | ||||| ||| | || ||||| ||||| || ||| || Sbjct 7996 AAGCGTGTTGAGAAGAACGGTGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGATTG 8055 Query 94369 TCCGACGTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAA 94427 | ||||||| || | | || || || | || | ||||| ||| || || Sbjct 8056 GCGGACGTTTACGG-TGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAA 8114 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 || | ||| ||| | || |||||| ||| | || | || ||| || Sbjct 8115 GGGTCGCAAGACTATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGA 8174 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||| || | || | ||| |||| |||||| || |||| |||| ||||||| || | Sbjct 8175 GACAGGAAACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAA 8234 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 ||| || ||| ||||| || |||||||| |||||||||||||| || |||| || Sbjct 8235 CCTTGGTACCATCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGA 8294 Query 94608 CGAGATTGCTGTGTGTAACCTGG 94630 ||| |||| ||||||||| ||| Sbjct 8295 TGAGGTTGCCGTGTGTAACTTGG 8317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494701345602640