Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1566 224 1e-53
>seq1566
Length=8448
Score = 224 bits (248), Expect = 1e-53
Identities = 500/743 (67%), Gaps = 8/743 (1%)
Strand=Plus/Plus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
||| |||| || || ||||| || || || || | | ||| |||| || || ||| ||
Sbjct 7579 GCCTCCCCAACACTCTTCAATGCTGGTACACCACAGGCTCAGCTGTCATCCTGCTTCTTG 7638
Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010
| ||| | |||| || || || || | |||| |||||| ||||| |
Sbjct 7639 GTCGAC-ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCAT 7697
Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGT 94068
|||||||| || || || ||||| | | |||| |||| ||||||| |||
Sbjct 7698 GATCTCAAAGACTGCCGGAGGTATCGGATTGAACATCCAT--CGTATCCGTGCCACCGGT 7755
Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128
| ||||| ||||||||| || | ||| ||||| |||| || |||||||| ||||||
Sbjct 7756 GCATACATTGCCGGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTC 7815
Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188
|||||| | || | ||||| ||||||||||| | | | ||| | ||||| ||
Sbjct 7816 AACAACACTGCCAGATACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATC 7875
Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248
|| | ||||| |||||||| || || | ||| | ||| || | ||||||||||||
Sbjct 7876 TACGTTGAGCCATGGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGC 7935
Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| || | | ||| | ||| | ||||||||||||||| | || || || || |||
Sbjct 7936 AAGGAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATG 7995
Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368
|| || || ||||| ||| | ||||| ||| | || ||||| ||||| || ||| ||
Sbjct 7996 AAGCGTGTTGAGAAGAACGGTGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGATTG 8055
Query 94369 TCCGACGTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAA 94427
| ||||||| || | | || || || | || | ||||| ||| || ||
Sbjct 8056 GCGGACGTTTACGG-TGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAA 8114
Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487
|| | ||| ||| | || |||||| ||| | || | || ||| ||
Sbjct 8115 GGGTCGCAAGACTATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGA 8174
Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547
||| || | || | ||| |||| |||||| || |||| |||| ||||||| || |
Sbjct 8175 GACAGGAAACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAA 8234
Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607
||| || ||| ||||| || |||||||| |||||||||||||| || |||| ||
Sbjct 8235 CCTTGGTACCATCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGA 8294
Query 94608 CGAGATTGCTGTGTGTAACCTGG 94630
||| |||| ||||||||| |||
Sbjct 8295 TGAGGTTGCCGTGTGTAACTTGG 8317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494701345602640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |