Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1054 120 3e-22
seq2445 116 4e-21
seq335 93.3 4e-14
>seq1054
Length=16682
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||||| || ||||| | | | |||||||| ||||||||||| ||| |
Sbjct 1490 CCACCACGCAGACGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGAC 1549
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| || || ||||| | | |||| || ||||| |||||||||||
Sbjct 1550 AAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 1609
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| || || || ||| | || | |||| | || | ||| |||| || |||||
Sbjct 1610 ATACCCTCCTTATC-TTGAATCTTCGACTTTACGTTGTCAATGGTATCGGATGATTCCAC 1668
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | ||| | ||| || || || || || || || |||||||||||
Sbjct 1669 CTCAAGCGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716
Score = 113 bits (124), Expect = 4e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||||||| || | | |||||||| || || |||| | |
Sbjct 1069 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCAAA 1128
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542
||| || ||||| |||||||| || ||||| || || || ||| || || | |
Sbjct 1129 GATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGGATCTTCGACTTGACGTT 1188
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | |||||| | ||||| ||||||| || | || || ||||||| || || ||
Sbjct 1189 GTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGAC 1248
Query 138603 AAAAATCTGCAT 138614
||||||||||||
Sbjct 1249 AAAAATCTGCAT 1260
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||| || ||| || ||||| | || || || |
Sbjct 1751 GACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCATCCTCCAACTGCTTTCCTGCG 1810
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538
| || || ||||| ||||||||||| || || || || || ||| | || | ||
Sbjct 1811 AAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATC-CTGAATCTTCGACTTCAC 1869
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
|||| || | |||||||| |||||| ||||| | || | || || |||||||| || |
Sbjct 1870 ATTG-TCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGGGTCT 1928
Query 138599 TTACAAAAATCTGCAT 138614
| || |||||||||||
Sbjct 1929 TGACGAAAATCTGCAT 1944
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||||| || || || | | | |||||||| || ||||||||||||
Sbjct 1946 CCACCACGCAGACGCAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 2005
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||| ||||| || |||| |||| ||||| || |||||||| ||
Sbjct 2006 AGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGG 2065
Query 138508 ATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || | || |||| || | ||| |||| ||||| ||
Sbjct 2066 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACATTG-TCGATGGTATCGGAGGACTCGAC 2124
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCA 138592
||| | || | || || |||||||
Sbjct 2125 CTCAAGGGTGATGGTCTTGCCAGTCA 2150
>seq2445
Length=7783
Score = 116 bits (128), Expect = 4e-21
Identities = 491/761 (65%), Gaps = 21/761 (3%)
Strand=Plus/Plus
Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145
|| || || |||||||| || ||| ||||| | || ||||||||||| | || |
Sbjct 101 AATGACGATGAGCGCTACTTCATCTCCCACGTTCTCGCTTTCTTCGCCGCGTCTGACGGA 160
Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCA 52204
|| || ||| ||||| ||||| | | |||| | | ||| | | | ||||| |
Sbjct 161 ATTGTCAACGAGAACCTTCTCGAGCGCTT-CAGCAGTGAGGTCCAAATCCCAGAGGCTCG 219
Query 52205 ATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCT 52264
| ||| || ||| ||| | | |||||| | | ||| | |||| ||| || ||
Sbjct 220 CTGCTTCTACGGTTTCCAAATCATGATCGAGAACATTCACGCCGAGACATACTCCCTCCT 279
Query 52265 CATTGAGCAGCTG-ATAAAAGATGAGCACGAGCGCG-ACACGCTGCTGAATGCGTTCGAG 52322
||| || || | || || || || | ||||| | || || | ||||| |||||
Sbjct 280 CATCGA-CACATACATCAAGGAGCAGGCCCAGCGCACATAC-CTCTTCAATGCCATCGAG 337
Query 52323 CACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACC 52382
| | || ||| | || ||||| | ||||| | | ||||||| | ||||
Sbjct 338 ACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAGGTGGATCCAA---GACAAG 394
Query 52383 G---CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCC 52439
| |||| | ||| ||||| |||| |||||||| || ||||| | || || |||
Sbjct 395 GATTCCACCTTTGCCCAGCGCCTGGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCC 454
Query 52440 GGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTC 52499
||| || ||| | || || | | || | | || | ||| | |||||||| |||
Sbjct 455 GGCTCGTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGCCTGACTTTC 514
Query 52500 AGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTAC 52559
||||||| | || || ||||| || || || ||||| ||||| || |||||| || |
Sbjct 515 TCCAACGAGCTCATCTCCCGCGATGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTC 574
Query 52560 AAG-ACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGT--TCAAGGAG 52616
|| | |||| || | | | | | ||| || |||| ||| |||
Sbjct 575 TCCCACCTTAGACACCGCCCAA--GCAAGCAGGCTG--TCC--AGGATGTCATCACCGAG 628
Query 52617 GCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATG 52676
|| || || ||||| | ||||| || || | || || || | |||||| ||||||
Sbjct 629 GCTGTCGCGATCGAGCAAGAGTTCTTGACAGAGGCACTCCCATGTGCGCTGCTCGGCATG 688
Query 52677 AACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC 52736
||||| | | ||| | |||||||| || || || || | ||| || | |||
Sbjct 689 AACGCCAACTTGATGAAGCAATACATCGAATTCGTCGCCGACAGGCTGCTGCTTTCCCTC 748
Query 52737 GGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTT 52796
|| | |||| || ||| || ||| || ||||| || ||| | ||||| || ||
Sbjct 749 GGTAACGAGAAGTTCTACAAGTCTACCAACCCCTTTGACTTCATGGAGAACATCTCCCTG 808
Query 52797 GAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
| || ||||||||||| ||||||||||| |||| ||| ||
Sbjct 809 GCAGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCCGACTA 849
>seq335
Length=36749
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461
||| || || || | | | |||||||| || ||||||||||| | || || ||
Sbjct 30414 CAAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATC 30355
Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521
|||||| || || |||| |||| || ||||| |||||||| || || || || |||||
Sbjct 30354 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 30295
Query 138522 GGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580
||| || || | ||||| | | ||||||| |||||||||||| | || | |
Sbjct 30294 CTGGATCTTGGACTTGACATTGT-CGATAGTGTCGGACGACTCCACCTCAAGGGTGATAG 30236
Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618
| || || ||||| || || || || || |||||| ||
Sbjct 30235 TCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 30198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496240477608480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |