Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1054 104 2e-17
>seq1054
Length=16682
Score = 104 bits (114), Expect = 2e-17
Identities = 147/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAATT 45195
|| || || || ||||| || || || || ||| ||| | | || ||| ||||| |
Sbjct 1742 TGGAGAGTCGACTCCTTCTGAATGTTGTAGTCG--GACAGAGTGCGACCATCCTCCAACT 1799
Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255
| ||||||||| | |||| || ||||||||||| |||||||| || ||||| ||||| |
Sbjct 1800 GCTTTCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGAATCT 1859
Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315
| || | || | ||||||||| |||||||| || | ||| | || ||||| |
Sbjct 1860 TCGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTTGCCAG 1919
Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340
| || || || || ||||| |||||
Sbjct 1920 TCAGGGTCTTGACGAAAATCTGCAT 1944
Score = 96.9 bits (106), Expect = 3e-15
Identities = 111/147 (76%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254
|| || || ||| | |||| || ||||||||||| || ||||| || |||||||||||
Sbjct 1343 TGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGAATC 1402
Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313
|| |||| || | || | ||| || || ||||||||||| || |||| || || ||
Sbjct 1403 TTGGACTTGA-CGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCC 1461
Query 45314 GGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| ||||| || || || ||||||||
Sbjct 1462 GGTGAGAGTCTTGACGAAGATTTGCAT 1488
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || ||| | |||||| || || ||||| || || || ||||||
Sbjct 1487 ATACCACCACGCAGACGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCG 1546
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| |||| || || || || | |||| || |||||||||||
Sbjct 1547 GACAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGA 1606
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || || ||||||||||| || || | || | || | ||| ||||| || ||
Sbjct 1607 GGAATACCCTCCTTATCTTGAATCTTCGACTTTA-CGTTGTCAATGGTATCGGATGATTC 1665
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||| || || || || || || || ||||| |||||
Sbjct 1666 CACCTCAAGCGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209
||||| ||||| || || ||||| | || | ||| || | || || || || |
Sbjct 1070 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCAAAG 1129
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
|||| || ||||||||||| || || || || ||||| || || || |||| || |
Sbjct 1130 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGGATCTTCGACTTGA-CGTT 1188
Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| | |||||| |||||||| || |||||||||| || || || || | || || ||
Sbjct 1189 GTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGAC 1248
Query 45329 AAAAATTTGCAT 45340
|||||| |||||
Sbjct 1249 AAAAATCTGCAT 1260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451983232758640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |