Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2493 123 4e-23
seq1566 120 5e-22
>seq2493
Length=2855
Score = 123 bits (136), Expect = 4e-23
Identities = 342/518 (66%), Gaps = 10/518 (2%)
Strand=Plus/Minus
Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944
|||||||||||||||||||| ||||| || ||| || | ||||||||| | |
Sbjct 797 AGATAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAGGTGATC 738
Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004
|||| || | ||||| |||||| ||||| || |||||| || |||||| |||||
Sbjct 737 TTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATG-AAGGC 679
Query 204005 GCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063
|| ||||| |||||||| | || ||||| ||| || |||||||| || |||||| |
Sbjct 678 ACCACGATCAGCGGCCATCTGGACGATGGTGCGCTGAGAGATCTCCCAGACAGTCTTGTA 619
Query 204064 CACGTCTCTGGTGT--GTTGAGGCACATCTT-CCCACGTCCT-GATCGAGCCGTTGTCGG 204119
| | || ||| | || | || || | || | ||| || || ||| |
Sbjct 618 GAGAGCCTTGATGTCGGCTGGG----ATGTTGGGAATGTTTTGGATGGATCCTCCGTCCG 563
Query 204120 CCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCA 204179
| || | | || || | | || ||||| |||| || || ||| | ||
Sbjct 562 CGATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCCTTGAGCA 503
Query 204180 GGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGG 204239
|| |||| | ||| || || || | ||| || | || | | | | ||| ||
Sbjct 502 ACCAAGGATTGACAACCTGGAACTCGCCAGCCAGGACACGGCGCGAGTAGATGTTCGAGG 443
Query 204240 TGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGG 204299
|| |||| ||||| ||||||| ||||| |||||| | |||| || ||||||||||
Sbjct 442 TGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCATGG 383
Query 204300 GAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCC 204359
| || | ||| ||||||||||| ||||||| | | || | | ||| |||||| ||
Sbjct 382 GTGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGACCTTGAGAGAGTCCC 323
Query 204360 AGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCG 204397
|||| || | | || | ||||||||||| |||
Sbjct 322 AGTCCCACAGGTCGGTAGGGGTGACGCCCCACATATCG 285
>seq1566
Length=8448
Score = 120 bits (132), Expect = 5e-22
Identities = 318/473 (67%), Gaps = 22/473 (5%)
Strand=Plus/Minus
Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990
|| |||||| ||||||||| || | |||||||||| |||||| || |||| ||||
Sbjct 8232 CTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTC 8173
Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACG 205045
||||||| ||| |||||| | ||| | | | |||| | ||||| | |
Sbjct 8172 AGTCTGAGACTCG-AGAATGGAGTACCAAAGCTTCTGGGCCTTGATAGTCTTGCGACCCT 8114
Query 205046 TACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCC 205105
| | || | ||||||||||| ||| || ||| | || ||| |||||| ||||||
Sbjct 8113 T-CTTCTCC---GACTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCC 8058
Query 205106 ATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCA--CATCTGATCGTCTTTCACCC 205163
|| || || |||| ||||| ||||| |||| ||| || | | || || | || |
Sbjct 8057 GCCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCA-CCGTTCTTC-TCAACAC 8000
Query 205164 TCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGT 205223
|| ||| || || || |||||| || |||| |||| |||||||| | | | | |
Sbjct 7999 GCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCT 7940
Query 205224 CGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCT 205282
| | || ||||||| ||||||||| || || | | || |||||||| |||||
Sbjct 7939 CCTTGCCGTGGTTCTTCCTCAAGTCCA-AGAACTCGAAGACATCAGCGTGCCATGGCTCA 7881
Query 205283 AACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCAC---CATGCGAGTC 205339
| | | ||| | || || || | |||||| ||||||||||| || || |||
Sbjct 7880 ACGTAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTG 7821
Query 205340 ATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGT 205392
| |||||| || || ||||| || || | |||||| | | | ||||| ||
Sbjct 7820 TT---GTTGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGT 7771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795120074019040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |