Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2445 277 2e-69
seq1054 123 2e-23
seq335 120 3e-22
>seq2445
Length=7783
Score = 277 bits (306), Expect = 2e-69
Identities = 583/863 (68%), Gaps = 25/863 (3%)
Strand=Plus/Minus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| ||||| || ||| | || ||||| || || || || ||||| |
Sbjct 868 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCTGC 809
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707
|| ||| ||| | ||| || || |||||||||| | |||||| ||| | | ||
Sbjct 808 CAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTAGACTTGTAGAACTTCTCGTTACC 749
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767
|| || | |||||||||||||| ||||| |||||||||||| ||| | |
Sbjct 748 GA---GGGAAAGCAGCAGCCTGTCGGCGACGAATTCGATGTATTGCTTCATCAAGTTGGC 692
Query 132768 ATTAAGTCCCAGCAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826
|| | || ||||| ||||| || || || || || | || ||||||||| ||||
Sbjct 691 GTTCATGCCGAGCAG-CGCACATGGGAGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGA 633
Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886
| || ||||||| || ||| || | | ||| || || || | || ||
Sbjct 632 CAGCCTCGGTGATGACATCCTGGACAGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGA 573
Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946
| | | ||| || ||||| || | ||||| || | ||| ||||| |||||| ||
Sbjct 572 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGA 513
Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006
|||||| ||| | |||||| || || || |||||||| || || | |||||| ||| |
Sbjct 512 AAGTCAGGCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGG 453
Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066
| ||||||| ||||| ||||| ||||| || |||||||||| | | || |||| || |
Sbjct 452 AGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCT 393
Query 133067 TG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125
|| || | |||||| | | ||||| |||||||| | |||| ||| || || || |||
Sbjct 392 TGTCTTG-GATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCG 334
Query 133126 ATGGCGTTCAACAAA------CGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATG 133179
||||| || || | || | || ||| | | ||| |||||||||
Sbjct 333 ATGGCATTGAAGAGGTATGTGCGCTGGGCCTGCTCCTTG------ATGTATGTGTCGATG 280
Query 133180 AGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCAC 133239
||| || || | || | ||| | |||||| || |||||| || ||||| |||||
Sbjct 279 AGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAG 220
Query 133240 CGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATG 133299
|| ||||| | || || || ||| ||||||| || || |||||||| ||
Sbjct 219 CGAGCCTCTGGGATTTGGACCTCACTGCTGAAGCGCTCGAGAAGGTTCTCGTTGACAATT 160
Query 133300 CCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTC 133359
||||| |||||||| || || || ||||| |||||| | |||||| | ||| ||
Sbjct 159 CCGTCAGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTG 100
Query 133360 AAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAAC 133416
| || | ||||||| | ||||||||| ||||| | |||||| | ||||| ||
Sbjct 99 AGACGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGGTCAATCTCCTCTGCAGTCCAGAAA 40
Query 133417 GACGCCTCGGCTTTTTTGTACAT 133439
||||| || || || ||||||||
Sbjct 39 GACGCTTCCGCCTTCTTGTACAT 17
>seq1054
Length=16682
Score = 123 bits (136), Expect = 2e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327
|| ||||| ||||||||| | || |||||| || |||| | | | | | ||||
Sbjct 2148 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAATGTTAAGAGC 2089
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| ||||| |||||||| ||| | ||||| || || || || | ||| || ||
Sbjct 2088 AAGATCCAAGACAAGGAGGGAATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAAAG 2029
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447
|| || || |||| ||||||||| ||||||||||||||| ||||| |||| || ||
Sbjct 2028 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTCAC 1969
Query 38448 TTGGTGCTGCGTTTGAGAGGCGG 38470
||||| |||||| || | || ||
Sbjct 1968 TTGGTCCTGCGTCTGCGTGGTGG 1946
Score = 111 bits (122), Expect = 2e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| |||||||| | || |||||| | ||
Sbjct 1944 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTCGAGTCGTCC 1885
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || || | || || ||||| ||||| | |||||
Sbjct 1884 GACACCATCGACAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCGGACCAG 1825
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || |||| ||| || || ||| |||| || | ||||| || ||||||||||
Sbjct 1824 CAGCGCCTGATTTTCGCAGGAAAGCAGTTGGAGGATGGTCGCACTCTGTCCGACTACAAC 1765
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| || ||||| |||| || || |||||||| |||
Sbjct 1764 ATTCAGAAGGAGTCGACTCTCCACTTGGTGCTTCGT 1729
Score = 102 bits (112), Expect = 8e-17
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || ||||| || || ||||| | || || || | ||
Sbjct 1716 ATGCAGATTTTCGTCAAGACCCTTACGGGGAAGACGATCACGCTTGAGGTGGAATCATCC 1657
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|| | | | | |||| ||||| || || | || || ||||| ||||| | ||||
Sbjct 1656 GATACCATTGACAACG--TAAAGTCGAAGATTCAAGATAAGGAGGGTATTCCTCCGGACC 1599
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | || || || |||||||| || | |||||| | ||| ||||
Sbjct 1598 AGCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATTACA 1539
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||| || ||||| | || |||||||||||||||||| || | || ||
Sbjct 1538 ACATTCAGAAGGAGTCCACCCTGCATTTGGTGCTGCGTCTGCGTGGTGG 1490
Score = 82.4 bits (90), Expect = 8e-11
Identities = 160/231 (69%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | || || || ||||| || |||| || ||| | |
Sbjct 1260 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCTTCT 1201
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || || |||| || || ||||| || || | |||||
Sbjct 1200 GACACCATTGACAACG-TCAAGTCGAAGATCCAGGATAAGGAGGGTATCCCACCGGACCA 1142
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | || || || ||||| || || | | | || || | |||||||||
Sbjct 1141 GCAGCGCCTGATCTTTGCCGGGAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTACAA 1082
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| ||||| ||| || || || |||||||| ||| | | || ||||
Sbjct 1081 CATCCAGAAGGAGAGC-ACTCTTCACTTGGTGCTCCGTCTTCGTGGTGGCC 1032
>seq335
Length=36749
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || |||||||| || |||||| | || || ||| | ||
Sbjct 30202 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 30261
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || || |||| ||||| |||||||||||| | |||||
Sbjct 30262 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 30321
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| ||||| || || | |||||||| |||||||||
Sbjct 30322 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAAC 30381
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGT 38452
||||| ||||| | || || || |||||
Sbjct 30382 ATCCAGAAGGAGTCCACCCTTCACTTGGT 30410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500150704866560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |