Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq2035 244 1e-59
seq415 107 2e-18
seq567 100 4e-16
>seq2035
Length=5668
Score = 244 bits (270), Expect = 1e-59
Identities = 474/692 (68%), Gaps = 12/692 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || || || | ||||| || ||||||||
Sbjct 2429 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAGATACCC 2370
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | | | || ||||| || || |||||||| || || || ||||| |||
Sbjct 2369 TCCTCGATGGTGAGGAGAGAGACATCGAAAGTTCCACCACCAAGATCGAAGATGAGAACG 2310
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| || | || ||||| ||||||||||| || || || || || || || ||
Sbjct 2309 TTGCGCTCACCCTCGACCTTCTTGTCGAGACCGTAAGCAATGGCAGCGGCGGTAGGCTCG 2250
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| ||| ||| || || || || | ||||| || || || || ||
Sbjct 2249 TTGATGATACGGAGAACGTTGAGTCCGGCGATCAGACCAGCATCCTTGGTGGCCTGGCGC 2190
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACT-TTCTTACCGAG 7755
|| || ||||| ||||| || ||||| || || || |||| |||| ||| | |||||
Sbjct 2189 TGGGAGTCGTTGAAGTAAGCGGGGACGGTGACAACAGCGTTGTTGACGGTTCCT-CCGAG 2131
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815
|| | || ||| | || ||| ||| || | ||| || || ||||| || | |
Sbjct 2130 GTAGGCCTCAGCGGTCTCACGCATCTTGACGAGGATCATGGAGGAGATCTCCTCGGGTGT 2071
Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTT--CAATCATGGGTTTATCCGCAGCACCG 7873
|| | || || || || || || || || | ||| | ||| ||| || | | |
Sbjct 2070 GAAGTCCTTGGTCTCGCCCTTGAACTCGACCTGGCAAAC-TGGCTTT--CCTC--CCTTG 2016
Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933
||| | ||| | | | | ||||| ||| | ||||||| ||| | |||||
Sbjct 2015 TCGATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCGTCGGCGAACTTG 1956
Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993
| ||||| |||||||| || || || || ||||| | ||||||||||| |||||||
Sbjct 1955 CGACCGATCAGACGCTTGGCGTCGAAGACGGTGTTGCTTGGGTTCATGGCGACTTGGTTC 1896
Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053
|| || || || ||||| ||||| || | || || || || ||| ||||||||||
Sbjct 1895 TTGGCGGCATCACCGATCAGACGCTC---GGTGTCAGTGAAGGCAACGAACGATGGGGTT 1839
Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113
|| || || || |||||||| ||||| || || | |||||| | | ||| || |||
Sbjct 1838 GTGCGGTTGCCCTGGTCGTTGGCAATGATCTCAATGCGGTCATCTCTGAAGATACCCACG 1779
Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGAT 8145
||||| || || || || ||||| ||||||||
Sbjct 1778 CACGAGTAGGTGGTACCCAAATCGATACCGAT 1747
Score = 140 bits (154), Expect = 4e-28
Identities = 254/372 (68%), Gaps = 0/372 (0%)
Strand=Plus/Minus
Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081
||||| || ||||| | || |||||||| || |||||||| ||||| || | || ||
Sbjct 2924 ATGGCCGCCTGGACGGCAGCACCGTATGCAACAGCCTCATCAGGGTTGATGGACTTGTTG 2865
Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141
| || || ||||| || || || | | | | || ||| | ||||| || || ||
Sbjct 2864 GGCTCCTTGCCGTTGAAGTAGTCGGTAATGAGCTTCTGGATTCTGGGGATACGGGTGGAA 2805
Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201
|| ||||| | ||||| || | || || | || |||| ||| | |||| ||
Sbjct 2804 CCTCCGACGAGGACGATCTCGTGGACCTTGGTCTTGTCGAGCTTGGCGTCTGCGAGGACA 2745
Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261
||||| || | | | |||||| | |||| |||||||||||||| || |||
Sbjct 2744 CGGTCGACGGGCTGGAGAGTGGAACGGAAGAGGTCCTGGCACAGTTCCTCAAAGCGAGCA 2685
Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321
||||| || || || |||||||||| || ||| | | || || || || |||| ||
Sbjct 2684 CGGGTGATTGAGGTGTAGAAATCAATACCCTCGAAGAGAGAGTCGATCTCGATGGAGGTC 2625
Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381
||||| | || || | || ||||| || ||||| || || || || | |||||| |||
Sbjct 2624 TGTGCTGAGGACGAAAGAGTGCGCTTGGCACGCTCGCATGCTGTGCGGAGACGACGGAGG 2565
Query 7382 GCACGCGGGTTA 7393
||||| | ||||
Sbjct 2564 GCACGGGCGTTA 2553
>seq415
Length=14565
Score = 107 bits (118), Expect = 2e-18
Identities = 222/327 (68%), Gaps = 5/327 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||||||||| || || || ||||| | || || || ||
Sbjct 5979 TCGAAATCCTCACCACCCAAGTGGGTGTCACCAGCGGTAGAAAGAACCTCGAAAGCGCCA 5920
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | || ||||| || || || ||||| || || | || | |
Sbjct 5919 CGGTCAATGGACAGGAGAGACACATCGAAGGTTCCTCCACCAAGATCGTA---GACAATG 5863
Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|| | || || | | | ||||||| |||||||| || | || || || || || ||
Sbjct 5862 ATC-TGGCGCTCACCATCGGTCTTATCAAGACCGTAGGCAAGGGCGGCGGCGGTAGGCTC 5804
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| | ||| || || ||| || |||||||| | | || || || || || ||||
Sbjct 5803 GTTGACAATGCGGAGGACGTTAAGTCCAGCAATGATACCAGCGTCCTTGGTGGCCTGTCT 5744
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| ||||| |||||||| ||||| || ||||| |||| || || |||||||||||
Sbjct 5743 CTGGTTGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTAACCTTCTTACCGAG 5684
Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782
|| || || |||| || ||||| ||
Sbjct 5683 GTAAGACTCAGCGACCTCCTTCATCTT 5657
>seq567
Length=52013
Score = 100 bits (110), Expect = 4e-16
Identities = 200/291 (69%), Gaps = 14/291 (5%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||||||||| || || || ||| | || || || || | |||
Sbjct 10182 ATCGAAATCCTCACCACCCAAGTGAGTGTCACCGTTGGTGGACTTAACCTCGAAAACACC 10241
Query 7516 TCCTTCAATGTTTA-ACAACGAA-ACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573
|||| | | | |||| | | ||| || || || |||||||| || | |
Sbjct 10242 --CTTCTGGATCTCGAGAACGGAGATATCGAAGGTTCCTCCACCCAGATCGTAGACAGCG 10299
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| | | | || || || ||| || |||||||| |||| ||| || || || ||
Sbjct 10300 ATGATTCTGTCCTCCTC------CTTCTCCAGACCGTAAGCGAGAGCAGCGGCGGTAGGC 10353
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTT 7691
|| |||| | ||| ||| ||||||||||||||| ||| | ||||| || || ||||
Sbjct 10354 TCGTTAACGACACGGAGAACGTTCAGGCCAGCAAT--TTGACCGGCATCCTTGGTGGCTT 10411
Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGA 7742
| || || || ||||| ||||| || ||||| || || || |||| | |||
Sbjct 10412 GACGCTGGGAGTCGTTGAAGTAAGCTGGGACGGTAACAACGGCGTTCTTGA 10462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635104743008560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |