Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1566 206 3e-48 seq2445 123 3e-23 >seq1566 Length=8448 Score = 206 bits (228), Expect = 3e-48 Identities = 619/944 (66%), Gaps = 21/944 (2%) Strand=Plus/Plus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTC-TTGAT 111604 |||||||| |||||||||| ||| ||||| | | || ||||| | ||| | Sbjct 7411 TATTTTGGCTTCAAGACCCTTGAGCGTTCATACCTTCTCCGCCTTGATGGCAACGTTGCT 7470 Query 111605 GGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGA 111664 | ||| |||||| ||||| | ||||| || ||| | || || || || || |||||||| Sbjct 7471 G-AAAGGCCACAGCACATGATTATGCGTGTGGCGGTTGGCATTCACGGCGAGGATATTGA 7529 Query 111665 TTCTGTTTTGGAGACATACGACAAGATGTCC-CGTGGTATGTTCATCCACGCAACACCAA 111723 | | ||||||||| || ||||| | || |||| ||||| | |||| Sbjct 7530 GAAGGCCATTGAGACATACAACCTCATGTCTTCCAAATAC-TTCACACACGCCTCCCCAA 7588 Query 111724 CCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACA 111783 | |||||||| |||||||||||| | || |||| || ||| | | | | | Sbjct 7589 CACTCTTCAATGCTGGTACACCACAGGCTCAGCTGTCATCCTGCTTCTTGGTCGACATGA 7648 Query 111784 AGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGT 111843 |||||||| || | || || || | ||| |||| ||||||| ||||||||| Sbjct 7649 AGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCAAAGA 7708 Query 111844 GGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAG 111903 || || |||||||| || |||||||| | || | |||| | | ||| | Sbjct 7709 CTGCCGGAGGTATCGGATTGAACATCCATCGTATCCGTGCCACCGGTGCATACATTGCCG 7768 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 |||| || || | || | ||||| |||| ||||| ||||| || ||| ||| || Sbjct 7769 GTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCCA 7828 Query 111964 GCTATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCAT 112020 | || || |||| | ||| ||| || | |||| |||| ||||||||| Sbjct 7829 GATACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTACGTTGAGCCAT 7888 Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGC 112080 ||||||| ||| || | |||||| | || ||| | ||||| || | ||||| | | Sbjct 7889 GGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGCAAGGAGGAAGTCC 7948 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | ||| || | |||| |||||||||||| || ||||||||||||||| | |||||| Sbjct 7949 GTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGA 8008 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTG 112199 ||| || | ||| ||||| | || || || || || || || | | || | Sbjct 8009 AGAACGGTGACTGGACTCTCATGTGCCCCAACGAATGC-CCTGGATTGGCGGACGTTTAC 8067 Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG-----GAAGAA-AGTCGGGCGACT 112253 ||||| ||||| || || |||||| || |||||| |||||| |||| |||| Sbjct 8068 GGTGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAAGGGTCGCAAGACT 8127 Query 112254 GCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGT 112313 | || |||| || | ||| | | |||||| ||||||| || ||||| || Sbjct 8128 ATCAAGG-CCCAGAAGC-----TTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGA 8181 Query 112314 ACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 112373 | || | ||| | ||||| || || || |||| ||||| || || ||||| | ||| Sbjct 8182 AACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGT 8241 Query 112374 GTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 112433 ||| || || ||||| || || || || | || | | | ||||||| Sbjct 8242 ACCATCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGATGAGGTT 8301 Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA 112477 || ||||||||| | ||||| | || || || | ||| || || Sbjct 8302 GCCGTGTGTAACTTGGCATCCCTTGCCCTGCCAACGTACGTTGA 8345 >seq2445 Length=7783 Score = 123 bits (136), Expect = 3e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| | |||||| | || | || || || | ||||| || || |||||| | | | Sbjct 320 CTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAGG 379 Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 ||| | | |||| | | ||||||| |||| || | || || || ||||| Sbjct 380 TGGATCCAAGACAAGGATTCCA-CCTTTGCCCAGCGCCTGGTTGCCTTCGCTGCCGTTGA 438 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268 ||||||||||||||| || || ||| | |||||| |||||||||||||| |||||||| Sbjct 439 GGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCAT 498 Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 | | || || |||||||||||||| ||||| || || ||||| |||||| Sbjct 499 GGCTGGCCTGACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGGTCTCCAC 550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620714978704480