Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1566 159 4e-34
seq2400 134 2e-26
seq1548 91.5 2e-13
seq541 89.7 6e-13
seq386 86.0 7e-12
seq2445 84.2 3e-11
>seq1566
Length=8448
Score = 159 bits (176), Expect = 4e-34
Identities = 589/908 (65%), Gaps = 31/908 (3%)
Strand=Plus/Minus
Query 110331 GTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT 110390
||| || | ||| ||||| |||| ||| || || ||| ||| | ||||||||| ||
Sbjct 8283 GTACTCGACAATCTCCGTGCACAGGTTAGAGCTGCGGATGGTACCAAGGTTCTTCTGGTT 8224
Query 110391 CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGA 110450
||| |||||| |||||||| || | |||| | ||| | || || || ||||| ||
Sbjct 8223 GCTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGA 8164
Query 110451 CTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCT 110509
|| |||||||| | ||| | | || | ||| || ||| | |||| ||||| |
Sbjct 8163 CTCGAGAATGGAGTACCAAAGCTTCTG-GGCCTTGATAGTC----TTGCGAC-CCTTCTT 8110
Query 110510 C-----CTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACC 110564
| |||||| || ||| | |||| || || | ||||| || || | | | |
Sbjct 8109 CTCCGACTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCA-ATC 8051
Query 110565 CTTCGCCTT-GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGA 110623
| || || || ||| || | ||| | ||| | || || |||||| | ||||||||
Sbjct 8050 CAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGA 7991
Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683
| || || || ||||| | || |||| | ||||||| ||| | || || | || |
Sbjct 7990 AGAGATCCGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGT 7931
Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743
|||| | | ||||| || || | || ||| | ||||||||| || | |||| |
Sbjct 7930 GGTTCTTCCTCAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGG 7871
Query 110744 CGATGGATCCCTTACGACGA------CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797
||| || || | | || || |||||| ||| || | || ||| ||||
Sbjct 7870 CGAAGGCACC---AGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGA 7814
Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGAC 110856
|||| | |||||| |||| || || | || | || || ||||| ||| | || ||
Sbjct 7813 AGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCAC 7754
Query 110857 TTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGT 110916
| |||||| || ||||| | || || ||||| || || ||| ||
Sbjct 7753 CGGT-GGCACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATG 7695
Query 110917 GCACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAG 110975
||||| ||| ||||||| |||| ||||| ||||| ||| |||| || | | |
Sbjct 7694 GCACATGTCT-TGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAA 7636
Query 110976 AAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035
||||| || |||| ||||| | || || || |||||||||||||| || | || ||
Sbjct 7635 GAAGCAGGATGACAGCTGAGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTG 7576
Query 111036 AATGAACAGACCTTGG--GACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTA 111093
||| || |||| ||||| ||||||||| || | || | ||| |
Sbjct 7575 TGTGA--AGTATTTGGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCG 7518
Query 111094 CCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCA 111153
|||||||| |||| || || ||||| | ||| | || ||| |||| | || |||
Sbjct 7517 CCGTGAATGCCAACCGCCACACGCATAATCATGTGCTGTGGCCTTTCAGCAACGTTGCCA 7458
Query 111154 TCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAA 111213
|||| || ||||||| ||| |||||||||| ||||| ||| | | ||||
Sbjct 7457 TCAAGGCGGAGAAGGTATGAACGCTCAAGGGTCTTGAAGCCAAAATATTGGTAGTTGAAA 7398
Query 111214 TCACGATC 111221
||||| ||
Sbjct 7397 TCACGGTC 7390
>seq2400
Length=6790
Score = 134 bits (148), Expect = 2e-26
Identities = 335/504 (66%), Gaps = 21/504 (4%)
Strand=Plus/Plus
Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564
||||||||| || || || | ||||| | || | || |||| | ||| ||| | ||
Sbjct 3602 ATCGAAACGGCCGGGACGCATAAGAGCCTTGTCCAAAACATCGGGTCTGTTCGTACCCGC 3661
Query 11565 AATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGAT 11624
| || |||| | || ||| ||| |||||||| || ||||| | |||||| |
Sbjct 3662 CAGAACAACAACCTGATCCTTCGTGTTGAAGCCGTCCATCTCCGTGAGGATCTGGTTCAG 3721
Query 11625 CGTCTGTTCACGCTCATCGTTG--------GAGGGCATACCAC-CTGCCGAACGCTTCTT 11675
||| || ||||| || || || | || || | || ||| |||
Sbjct 3722 CGTGCTCTCGCGCTCCTCATTACCGCCTCCGAAGCCAGACTTCTCTCTCGA------CTT 3775
Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGC--ACGTGCCTGT 11733
||||| |||||||||||| |||||||| | ||||||||| || | | || |||
Sbjct 3776 ACCGATAGCGTCAATCTCGTCGATGAAGATGATACACGG--CGTCGTCTTGCGGGCCATG 3833
Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCG 11793
|||| || || || |||||| | || ||||| ||||||||||| | ||| | |
Sbjct 3834 GCGAACAGGTCGCGCACACGCGAAGGACCGACACCGACGAACATCTCCATGAACTCGGAA 3893
Query 11794 GCA-GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGT 11852
|| || ||||| ||||||||| ||||| || ||| |||| || ||||| ||
Sbjct 3894 CCACTGACGCTGAA-GAAGGGAACGCCGGACTCGCCGGCGGTGGCCTTCGCTAGGAGGGT 3952
Query 11853 CTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCC 11912
|||||| || || || | ||||| || | || || ||||| |||||||| || |
Sbjct 3953 CTTACCAGTTCCGGGAGGACCAGACAGGATAGCACCGCGGGGAATCTTGGCGCCCAGCCT 4012
Query 11913 AAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGA 11972
|||| ||||| ||| |||| |||||| || | |||| | |||| ||| ||
Sbjct 4013 CGAGTAACGCTCCGGCGTCTTCAGGAAGCTGACGAACTCCATGATTTCCAGCTTTGCCTC 4072
Query 11973 GTCGATACCCTCAACATCGGTGAA 11996
||| ||||| | ||||||| |||
Sbjct 4073 GTCCATACCAGCCACATCGGCGAA 4096
>seq1548
Length=6717
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/85 (84%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 5437 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 5378
Query 136777 GGGAACAGCTTTTAGATATATTTTT 136801
| || ||| | | ||| ||||||
Sbjct 5377 GTGACCAGTATATTCATACATTTTT 5353
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 4380 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 4439
Query 136777 GGGAACA 136783
| || ||
Sbjct 4440 GTGACCA 4446
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 5903 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 5844
Query 136777 GGGAACA 136783
| || ||
Sbjct 5843 GTGACCA 5837
>seq541
Length=18253
Score = 89.7 bits (98), Expect = 6e-13
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 3819 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 3760
Query 136777 GGGAACA 136783
|||| ||
Sbjct 3759 GGGACCA 3753
>seq386
Length=12067
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 6987 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 6928
Query 136777 GGGAACA 136783
| || ||
Sbjct 6927 GTGACCA 6921
>seq2445
Length=7783
Score = 84.2 bits (92), Expect = 3e-11
Identities = 159/231 (69%), Gaps = 5/231 (2%)
Strand=Plus/Minus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|| || || ||||| || ||||||||||| || ||| || |||| |||||| ||
Sbjct 549 TGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTCAGGCCAGCCATGAGACCA 490
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| ||||| ||||| || || | || || || |||||||| ||||| ||
Sbjct 489 CGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAGATACCCTCAACGGCA 430
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCG-AGACTTGTC---GAACCACTTGAGAGC 119683
||||| || | || |||| || |||||| | | |||||| || |||| ||| |||
Sbjct 429 GCGAAGGCAACCAGGCGCTGGGC-AAAGGTGGAATCCTTGTCTTGGATCCACCTGACAGC 371
Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734
||||| |||||| || ||||| |||| || | |||||| | ||| ||
Sbjct 370 CCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTGAAGAG 320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588949981985200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |