Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1566 230 3e-55
seq2445 125 8e-24
>seq1566
Length=8448
Score = 230 bits (254), Expect = 3e-55
Identities = 624/940 (66%), Gaps = 19/940 (2%)
Strand=Plus/Minus
Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507
|| ||| |||| ||||| | |||||||| || || || || |||||| | | | |
Sbjct 8342 ACGTACGTTGGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAG 8283
Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567
||||| | ||| || || |||| ||| || || || || || | ||||| |||||
Sbjct 8282 TACTCGACAATCTCCGTGCACAGGTTAGAGCTGCGGATGGTACCAAGGTTCTTCTGGTTG 8223
Query 106568 CTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAC 106627
||||| |||||| ||||||||||| | |||| | || | || ||||| ||||| |||
Sbjct 8222 CTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGAC 8163
Query 106628 TTGAGAATTGCCTTCCACA-CATCGGCGGC-TGGTACAATGGCGTTGGCCCGTC-CCTCC 106684
| |||||| | | ||| | | || | | | || || | || | ||| || ||||
Sbjct 8162 TCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATAGTCTTGC---GACCCTTCTTCTCC 8106
Query 106685 GCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGT 106744
| |||||| || |||||| || || ||||| ||||| |||| | | || ||
Sbjct 8105 GACTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGG- 8047
Query 106745 GCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAG 106803
|| || || || || | |||| ||| | ||| || |||||| ||||||||||| ||
Sbjct 8046 GCATTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAG 7987
Query 106804 GTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGT 106862
|| || ||||| || | | || | || | ||| || | || || | || ||||
Sbjct 7986 ATCCGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGA-CTTCCTCCTTGCCGTGGT 7928
Query 106863 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922
| | || || | |||||| | || ||| |||||||||||||||| |||| ||||
Sbjct 7927 TCTTCCTCAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGGCGA 7868
Query 106923 TAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACG 106978
| || | | | | ||| | || | || || | || ||| ||| || |||
Sbjct 7867 AGGCACCAGGGCGCTTGTTG-CCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACG 7809
Query 106979 CGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTG 107038
|| ||||| |||| ||||| | || | || || || || ||| | ||
Sbjct 7808 CGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTG 7749
Query 107039 GCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACAC 107098
|| | | | |||||||| || || ||||| || || ||||||||| |||||
Sbjct 7748 GCACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACAT 7689
Query 107099 TCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAA 107158
| | || || |||||||||| | || |||||||| || ||| | ||||||
Sbjct 7688 GTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAG 7629
Query 107159 CTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAAC 107218
|||| ||| | ||||||||||||||||||||| ||||| | ||||| ||||
Sbjct 7628 GATGACAGCTGAGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAA- 7570
Query 107219 ATACCTTGG--GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 107276
|| |||| ||||| || ||||||||| | | | ||||| || || ||||| |
Sbjct 7569 GTA-TTTGGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAA 7511
Query 107277 TGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCC 107336
|||| | ||||||||||||| ||||| || || |||| | | ||||||| || |
Sbjct 7510 TGCCAACCGCCACACGCATAATCATGTGCTGTGGCCTTTCAGCAACGTTGCCATCAAGGC 7451
Query 107337 GTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376
| |||| || ||||||||| |||| ||||| ||
Sbjct 7450 GGAGAAGGTATGAACGCTCAAGGGTCTTGAAGCCAAAATA 7411
>seq2445
Length=7783
Score = 125 bits (138), Expect = 8e-24
Identities = 163/223 (73%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
||||||||||||||| ||||| || || || || ||||| ||||| | |||||||||
Sbjct 550 GTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTCAGGCCAGCCATGAGACC 491
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
|||||||| | ||| |||||| | ||| || |||||||||||||||||||| ||
Sbjct 490 ACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAGATACCCTCAACGGC 431
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463
|| || |||| ||||||| ||| |||| | || | |||| | | ||| | | |
Sbjct 430 AGCGAAGGCAACCAGGCGCTGGGCAAAGGTG-GAATCCTTGTCTTGGATCCACCTGACAG 372
Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506
|||| | |||||||||| || || || | || | ||||||
Sbjct 371 CCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGC 329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589954737598160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |