Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq335 150 4e-31
seq1054 145 2e-29
>seq335
Length=36749
Score = 150 bits (166), Expect = 4e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| || | |||||| |||||||| || || || ||||| || | ||| || |
Sbjct 30419 AGTCTCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 30360
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| ||||||||||| || |||||||| || || || ||||| || ||||| || ||
Sbjct 30359 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCC 30300
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||| || || || |||||| || || || ||||| || ||||| ||||||||
Sbjct 30299 TTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTG 30240
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || |||| || || ||||| | ||||||
Sbjct 30239 ATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 30202
>seq1054
Length=16682
Score = 145 bits (160), Expect = 2e-29
Identities = 156/204 (76%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996
|| || |||||||| || ||||| |||||||||| |||| || | ||||| || |||||
Sbjct 1514 TGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGACAAG-GTGCGGCCATCCTCCAGCTG 1572
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| || ||||| || || || ||||| |||||||| || || || |||||||| ||
Sbjct 1573 CTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTATCTTGAATCTT 1632
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| ||||| |||||||| || || |||||| ||||| || | |||||| || ||
Sbjct 1633 CGACTTTACGTTGTCAATGGTATCGGATGATTCCACCTCAAGCGTGATCGTCTTCCCCGT 1692
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | |||||
Sbjct 1693 AAGGGTCTTGACGAAAATCTGCAT 1716
Score = 140 bits (154), Expect = 7e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
|||||| || | |||||||| || || || |||||||| | | ||| | || || ||
Sbjct 1279 AACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCGTCCTC 1338
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||| || ||||| || || || || ||||| || || ||||| || || |||||
Sbjct 1339 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTG 1398
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||| || ||||||||| || ||||| ||||| || ||||| || |||| |||||
Sbjct 1399 AATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTT 1458
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || | ||| || ||||| | ||||||
Sbjct 1459 TCCGGTGAGAGTCTTGACGAAGATTTGCAT 1488
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||||||| ||| || || || ||||| ||| || || |||||||| ||||||||
Sbjct 1057 GTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTG 1116
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| || || || ||||| || || || || || || || || || ||
Sbjct 1117 CTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGGATCTT 1176
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| ||||||||||| ||| || || || || |||| |||||||| ||
Sbjct 1177 CGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGT 1236
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| || || || || | |||||
Sbjct 1237 CAAGGTCTTGACAAAAATCTGCAT 1260
Score = 120 bits (132), Expect = 7e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| ||||| || ||||| ||||| |||| ||||| | ||||| || | |||
Sbjct 1741 GTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCATCCTCCAACTG 1800
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| |||||||| || || || || ||||| ||||||||||| || || || ||||| ||
Sbjct 1801 CTTTCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGAATCTT 1860
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || || || |||||||| || || || || | || | ||||| || ||
Sbjct 1861 CGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTTGCCAGT 1920
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | |||||
Sbjct 1921 CAGGGTCTTGACGAAAATCTGCAT 1944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109431363366578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |