Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1566 91.5 2e-13
>seq1566
Length=8448
Score = 91.5 bits (100), Expect = 2e-13
Identities = 369/574 (64%), Gaps = 8/574 (1%)
Strand=Plus/Minus
Query 47993 GTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGAT 48052
||| || || |||||||| | ||| ||||| |||| || || ||||||| || | ||
Sbjct 8214 GTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAAT 8155
Query 48053 AGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTT 48112
|| | ||||| || ||||| ||| | | | || || || ||||||||
Sbjct 8154 GGAGTACCAAAGCTTCTGGGCCTTGATAGTCTTGCGACCCTTCTTCTCCGACTCGTATTT 8095
Query 48113 A--GTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTA 48170
||| | | | ||| || ||||| || || || | | || ||||| ||||| ||
Sbjct 8094 CTCGTAGAGAGC--CTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTG 8037
Query 48171 GGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATC 48230
|| ||||| | | ||| || | | || | || | |||| || | ||| || |||
Sbjct 8036 GGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATC 7977
Query 48231 CAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTT-AAG 48289
|| ||||| || || || | | | | ||| || ||||| ||| | | |||
Sbjct 7976 CAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAG 7917
Query 48290 TTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGG 48349
| |||||| || | | |||||| |||||||| || | || || || | |||| ||
Sbjct 7916 TCCAAGAAC-TCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGGCGAAGGCACCAGG 7858
Query 48350 TCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGG 48409
|| || || || || || || | ||||||||||| ||||| | || | | ||| ||
Sbjct 7857 GCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGG 7798
Query 48410 GACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATT 48469
|| ||||| || || | || ||||| || | ||| || || | || | |||
Sbjct 7797 AACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACG 7738
Query 48470 ACTAAT-TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGG 48528
| || | ||| || ||||| || || | || || || | ||||| || || |
Sbjct 7737 ATGGATGTTCAAT-CCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTG 7679
Query 48529 TATCATAAATTCCTTCTATACTATCATCTATCAT 48562
| ||||| || || || |||||||| || ||||
Sbjct 7678 TGTCATAGATACCCTCAATACTATCCTCCTTCAT 7645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562083968843760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |